RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 MPZL3Q6UWV2 235 aa23.38■■□□□ 1.33
CNEP1R1-202ENST00000427478 TSHZ1Q6ZSZ6 1077 aa23.38■■□□□ 1.33
CNEP1R1-202ENST00000427478 RHOT2Q8IXI1 618 aa23.38■■□□□ 1.33
CNEP1R1-202ENST00000427478 LRRC1Q9BTT6 524 aa23.38■■□□□ 1.33
CNEP1R1-202ENST00000427478 CES2O00748 559 aa23.37■■□□□ 1.33
CNEP1R1-202ENST00000427478 GZMAP12544 262 aa23.37■■□□□ 1.33
CNEP1R1-202ENST00000427478 PROZP22891 400 aa23.37■■□□□ 1.33
CNEP1R1-202ENST00000427478 GPC5P78333 572 aa23.37■■□□□ 1.33
CNEP1R1-202ENST00000427478 DUSP28Q4G0W2 176 aa23.37■■□□□ 1.33
CNEP1R1-202ENST00000427478 OR6J1Q8NGC5 347 aa23.37■■□□□ 1.33
CNEP1R1-202ENST00000427478 ABHD16BQ9H3Z7 469 aa23.37■■□□□ 1.33
CNEP1R1-202ENST00000427478 CTTNBP2NLQ9P2B4 639 aa23.37■■□□□ 1.33
CNEP1R1-202ENST00000427478 CPSF3Q9UKF6 684 aaKnown RBP23.37■■□□□ 1.33
CNEP1R1-202ENST00000427478 AMFRQ9UKV5 643 aa23.37■■□□□ 1.33
CNEP1R1-202ENST00000427478 ATP8B1O43520 1251 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 MRPS25P82663 173 aaKnown RBP23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 CUL2Q13617 745 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 NCOA4Q13772 614 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 EEF1DP3Q658K8 133 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 SCARA3Q6AZY7 606 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 WDR49Q8IV35 697 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 FUT8Q9BYC5 575 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 SLC15A5A6NIM6 579 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 H3BRB1 525 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 ATMINO43313 823 aaPredicted RBP23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 PPFIA4O75335 1185 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 MMP3P08254 477 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 IQCF3P0C7M6 154 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 NOP14P78316 857 aaKnown RBP23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 THNSL1Q8IYQ7 743 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 KRT222Q8N1A0 295 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 PBKQ96KB5 322 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 MTMR12Q9C0I1 747 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 TUT1Q9H6E5 874 aaKnown RBP23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 IFT122Q9HBG6 1241 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 PTPRHQ9HD43 1115 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 CHORDC1Q9UHD1 332 aaPredicted RBP23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 AKT3Q9Y243 479 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 COL1A2P08123 1366 aa23.36■■□□□ 1.33
CNEP1R1-202ENST00000427478 UMODL1Q5DID0 1318 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 IGF2BP3O00425 579 aaKnown RBP eCLIP23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 MAGEB2O15479 319 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 ADCY6O43306 1168 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 CEP104O60308 925 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 MCM3P25205 808 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 PHKA2P46019 1235 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 OSTNP61366 133 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 GRM1Q13255 1194 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 RASAL3Q86YV0 1011 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 LINC01465Q8N7H1 131 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 HDAC7Q8WUI4 952 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 HES6Q96HZ4 224 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 NUB1Q9Y5A7 615 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 DOCK3Q8IZD9 2030 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 CSDE1O75534 798 aaKnown RBP23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 CLTAP09496 248 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 CEP120Q8N960 986 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 HINFPQ9BQA5 517 aa23.35■■□□□ 1.33
CNEP1R1-202ENST00000427478 KAT6AQ92794 2004 aa23.34■■□□□ 1.33
CNEP1R1-202ENST00000427478 A0A087WZ62 844 aa23.34■■□□□ 1.33
CNEP1R1-202ENST00000427478 ITGBL1O95965 494 aaPredicted RBP23.34■■□□□ 1.33
CNEP1R1-202ENST00000427478 VTNP04004 478 aa23.34■■□□□ 1.33
CNEP1R1-202ENST00000427478 ZNF157P51786 506 aaPredicted RBP23.34■■□□□ 1.33
CNEP1R1-202ENST00000427478 AP3M2P53677 418 aa23.34■■□□□ 1.33
CNEP1R1-202ENST00000427478 USP38Q8NB14 1042 aa23.34■■□□□ 1.33
CNEP1R1-202ENST00000427478 FDXACB1Q9BRP7 624 aaPredicted RBP23.34■■□□□ 1.33
CNEP1R1-202ENST00000427478 SELENOOQ9BVL4 669 aa23.34■■□□□ 1.33
CNEP1R1-202ENST00000427478 NFKBIZQ9BYH8 718 aa23.34■■□□□ 1.33
CNEP1R1-202ENST00000427478 ACO1P21399 889 aaKnown RBP23.33■■□□□ 1.33
CNEP1R1-202ENST00000427478 HADHBP55084 474 aaKnown RBP23.33■■□□□ 1.33
CNEP1R1-202ENST00000427478 SLC7A5Q01650 507 aa23.33■■□□□ 1.33
CNEP1R1-202ENST00000427478 C8orf74Q6P047 294 aa23.33■■□□□ 1.33
CNEP1R1-202ENST00000427478 MTHFD1LQ6UB35 978 aa23.33■■□□□ 1.33
CNEP1R1-202ENST00000427478 CDT1Q9H211 546 aa23.33■■□□□ 1.33
CNEP1R1-202ENST00000427478 PRMT7Q9NVM4 692 aaPredicted RBP23.33■■□□□ 1.33
CNEP1R1-202ENST00000427478 PCDHB4Q9Y5E5 795 aa23.33■■□□□ 1.33
CNEP1R1-202ENST00000427478 CST3P01034 146 aaPredicted RBP23.33■■□□□ 1.32
CNEP1R1-202ENST00000427478 PLA2G4AP47712 749 aa23.33■■□□□ 1.32
CNEP1R1-202ENST00000427478 PPFIA1Q13136 1202 aa23.33■■□□□ 1.32
CNEP1R1-202ENST00000427478 IQSEC1Q6DN90 963 aa23.33■■□□□ 1.32
CNEP1R1-202ENST00000427478 ZNF653Q96CK0 615 aa23.33■■□□□ 1.32
CNEP1R1-202ENST00000427478 IMPG2Q9BZV3 1241 aa23.33■■□□□ 1.32
CNEP1R1-202ENST00000427478 SLC5A4Q9NY91 659 aa23.33■■□□□ 1.32
CNEP1R1-202ENST00000427478 DMGDHQ9UI17 866 aaKnown RBP23.33■■□□□ 1.32
CNEP1R1-202ENST00000427478 TNFSF13BQ9Y275 285 aa23.33■■□□□ 1.32
CNEP1R1-202ENST00000427478 PCDHB2Q9Y5E7 798 aa23.33■■□□□ 1.32
CNEP1R1-202ENST00000427478 TBXAS1P24557 533 aaPredicted RBP23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 TMOD1P28289 359 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 TCEAL1Q15170 157 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 GRIK4Q16099 956 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 CLEC16AQ2KHT3 1053 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 PRAMEF19Q5SWL8 479 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 ACAD10Q6JQN1 1059 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 GSPT2Q8IYD1 628 aaKnown RBP23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 L1RE1Q9UN81 338 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 TMEM110-MUSTN1A8MSY1 372 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 HOXC6P09630 235 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 TFAMQ00059 246 aaKnown RBP23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 SURF1Q15526 300 aa23.32■■□□□ 1.32
CNEP1R1-202ENST00000427478 TAF1CQ15572 869 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms