RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 PNMA2Q9UL42 364 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 PCDHA3Q9Y5H8 950 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 MROH7Q68CQ1 1323 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 MYPNQ86TC9 1320 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 PMM2O15305 246 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 SUPT20HL2P0C7V6 817 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 GLRA2P23416 452 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 PIK3CAP42336 1068 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 PMS2P54278 862 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 SLC29A2Q14542 456 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 SUPT20HL1Q3ZLR7 823 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 TREML2Q5T2D2 321 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 CATSPERGQ6ZRH7 1159 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 TMEM130Q8N3G9 435 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 MCPH1Q8NEM0 835 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 OR5B17Q8NGF7 314 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 FNBP1Q96RU3 617 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 CCT8L2Q96SF2 557 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 SENP7Q9BQF6 1050 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 SGIP1Q9BQI5 828 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 WNT8AQ9H1J5 351 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 CHST7Q9NS84 486 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 FBXO40Q9UH90 709 aa12.44□□□□□ -0.42
FIRRE-201ENST00000427391 PHIPQ8WWQ0 1821 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 SPATA31C2B4DYI2 1134 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 SCP2P22307 547 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 MAPK4P31152 587 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 COILP38432 576 aaPredicted RBP12.43□□□□□ -0.42
FIRRE-201ENST00000427391 VPS41P49754 854 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 SNRPFP62306 86 aaKnown RBP12.43□□□□□ -0.42
FIRRE-201ENST00000427391 MTMR3Q13615 1198 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 DHX34Q14147 1143 aaKnown RBP12.43□□□□□ -0.42
FIRRE-201ENST00000427391 NLRP14Q86W24 1093 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 RDM1Q8NG50 284 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 MYCBPAPQ8TBZ2 947 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 ZNF473Q8WTR7 871 aaKnown RBP12.43□□□□□ -0.42
FIRRE-201ENST00000427391 PSPC1Q8WXF1 523 aaKnown RBP12.43□□□□□ -0.42
FIRRE-201ENST00000427391 KLRG1Q96E93 195 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 PWWP2AQ96N64 755 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 C11orf70Q9BRQ4 267 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 AS3MTQ9HBK9 375 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 ZNF112Q9UJU3 913 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 AGO2Q9UKV8 859 aaKnown RBP12.43□□□□□ -0.42
FIRRE-201ENST00000427391 ADAMTS5Q9UNA0 930 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 ARID2Q68CP9 1835 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 VGLL3A8MV65 326 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 MTA2O94776 668 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 RPS12P25398 132 aaKnown RBP12.43□□□□□ -0.42
FIRRE-201ENST00000427391 CHRNA3P32297 505 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 TGFB2P61812 414 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 QPCTQ16769 361 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 XKR3Q5GH77 459 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 TMEM270Q6UE05 265 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 PRUNE1Q86TP1 453 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 MCOLN2Q8IZK6 566 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 KLHL11Q9NVR0 708 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 R3HDM2Q9Y2K5 976 aaKnown RBP12.43□□□□□ -0.42
FIRRE-201ENST00000427391 DOCK1Q14185 1865 aa12.43□□□□□ -0.42
FIRRE-201ENST00000427391 FAM187AA6NFU0 413 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 FOXO6A8MYZ6 492 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 EXTL3O43909 919 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 UNGP13051 313 aaPredicted RBP12.42□□□□□ -0.42
FIRRE-201ENST00000427391 HIRAP54198 1017 aaPredicted RBP12.42□□□□□ -0.42
FIRRE-201ENST00000427391 RWDD2BP57060 319 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 IFI35P80217 286 aaPredicted RBP12.42□□□□□ -0.42
FIRRE-201ENST00000427391 MIS18BP1Q6P0N0 1132 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 C15orf39Q6ZRI6 1047 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 ANKRD35Q8N283 1001 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 SLC17A8Q8NDX2 589 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 VTI1AQ96AJ9 217 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 HVCN1Q96D96 273 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 ZBTB10Q96DT7 871 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 ZNF302Q9NR11 478 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 C4BPAP04003 597 aaKnown RBP12.42□□□□□ -0.42
FIRRE-201ENST00000427391 GARTP22102 1010 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 MARK3P27448 753 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 TNFSF9P41273 254 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 PPP2R2AP63151 447 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 TCEAL1Q15170 157 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 ZACNQ401N2 412 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 RUFY4Q6ZNE9 571 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 ZBTB33Q86T24 672 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 TRIM50Q86XT4 487 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 EPS8L3Q8TE67 593 aaKnown RBP12.42□□□□□ -0.42
FIRRE-201ENST00000427391 AZI2Q9H6S1 392 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 SPON1Q9HCB6 807 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 RBAKQ9NYW8 714 aaPredicted RBP12.42□□□□□ -0.42
FIRRE-201ENST00000427391 PCYOX1Q9UHG3 505 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 RASAL2Q9UJF2 1139 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 USTQ9Y2C2 406 aa12.42□□□□□ -0.42
FIRRE-201ENST00000427391 K7ERI5 159 aa12.41□□□□□ -0.42
FIRRE-201ENST00000427391 MAFGO15525 162 aa12.41□□□□□ -0.42
FIRRE-201ENST00000427391 GCNT1Q02742 428 aa12.41□□□□□ -0.42
FIRRE-201ENST00000427391 STRN3Q13033 797 aa12.41□□□□□ -0.42
FIRRE-201ENST00000427391 GNPTABQ3T906 1256 aa12.41□□□□□ -0.42
FIRRE-201ENST00000427391 CCDC38Q502W7 563 aa12.41□□□□□ -0.42
FIRRE-201ENST00000427391 SGO2Q562F6 1265 aa12.41□□□□□ -0.42
FIRRE-201ENST00000427391 EMC10Q5UCC4 262 aa12.41□□□□□ -0.42
FIRRE-201ENST00000427391 XRRA1Q6P2D8 792 aa12.41□□□□□ -0.42
FIRRE-201ENST00000427391 ANKS1BQ7Z6G8 1248 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms