RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 PHLPP2Q6ZVD8 1323 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 ING5Q8WYH8 240 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
HDLBP-213ENST00000427007 SNX27Q96L92 541 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 VPS13AQ96RL7 3174 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 FOXQ1Q9C009 403 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 CDT1Q9H211 546 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 SLC2A4RGQ9NR83 387 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 DNMT3BQ9UBC3 853 aaKnown RBP11.22□□□□□ -0.61
HDLBP-213ENST00000427007 MTRRQ9UBK8 725 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 TNFSF13BQ9Y275 285 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 SIT1Q9Y3P8 196 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 PCDHB6Q9Y5E3 794 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 ZFP37Q9Y6Q3 630 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-213ENST00000427007 R4GN57 208 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 NOTCH4Q99466 2003 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 SMIM28A0A1B0GU29 152 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 HIP1RO75146 1068 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 HARSP12081 509 aaKnown RBP11.21□□□□□ -0.61
HDLBP-213ENST00000427007 GRM5P41594 1212 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 NPTX2P47972 431 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 TRAPPC10P48553 1259 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 TOB1P50616 345 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-213ENST00000427007 YARSP54577 528 aaKnown RBP11.21□□□□□ -0.61
HDLBP-213ENST00000427007 SNW1Q13573 536 aaKnown RBP11.21□□□□□ -0.61
HDLBP-213ENST00000427007 PABPC1LQ4VXU2 614 aaKnown RBP11.21□□□□□ -0.61
HDLBP-213ENST00000427007 PHLDB3Q6NSJ2 640 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 TAS1R3Q7RTX0 852 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 APBB1IPQ7Z5R6 666 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-213ENST00000427007 DAW1Q8N136 415 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 IGSF22Q8N9C0 903 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 KCNG4Q8TDN1 519 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 ZSCAN31Q96LW9 406 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-213ENST00000427007 UROC1Q96N76 676 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 ACO2Q99798 780 aaKnown RBP11.21□□□□□ -0.61
HDLBP-213ENST00000427007 KXD1Q9BQD3 176 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 RUSC1Q9BVN2 902 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 CCDC94Q9BW85 323 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-213ENST00000427007 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.61
HDLBP-213ENST00000427007 KMT5AQ9NQR1 393 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 DLGAP2Q9P1A6 1054 aa11.21□□□□□ -0.61
HDLBP-213ENST00000427007 CACNA1HO95180 2353 aa11.21□□□□□ -0.62
HDLBP-213ENST00000427007 CITO14578 2027 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 SFI1A8K8P3 1242 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 PODXLO00592 558 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 TRAPPC3O43617 180 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 GLULP15104 373 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 U2AF2P26368 475 aaKnown RBP eCLIP11.2□□□□□ -0.622e-9■■■□□ 15.4
HDLBP-213ENST00000427007 ARPP19P56211 112 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 ROR1Q01973 937 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 DMP1Q13316 513 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-213ENST00000427007 PDIA5Q14554 519 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 ZRSR1Q15695 479 aaKnown RBP11.2□□□□□ -0.62
HDLBP-213ENST00000427007 IL17AQ16552 155 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 UVSSAQ2YD98 709 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 KRT79Q5XKE5 535 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 ANKS3Q6ZW76 656 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 MTSS1LQ765P7 747 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 KCNK18Q7Z418 384 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 NPAS3Q8IXF0 933 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 PJA1Q8NG27 643 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 MCRS1Q96EZ8 462 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 ZMAT2Q96NC0 199 aaKnown RBP11.2□□□□□ -0.62
HDLBP-213ENST00000427007 TCHPQ9BT92 498 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 MRPL4Q9BYD3 311 aaKnown RBP11.2□□□□□ -0.62
HDLBP-213ENST00000427007 RAB34Q9BZG1 259 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 PTPRHQ9HD43 1115 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 TOPORSQ9NS56 1045 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-213ENST00000427007 DNM3Q9UQ16 869 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 BACE2Q9Y5Z0 518 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 PDCD11Q14690 1871 aaKnown RBP11.2□□□□□ -0.62
HDLBP-213ENST00000427007 PATJQ8NI35 1801 aa11.2□□□□□ -0.62
HDLBP-213ENST00000427007 MYH11P35749 1972 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 WDR27A2RRH5 827 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 SLC16A4O15374 487 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 RHOP08100 348 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 SP9P0CG40 484 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 STARD6P59095 220 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 RAD51AP2Q09MP3 1159 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 MAPK7Q13164 816 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 MLF2Q15773 248 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-213ENST00000427007 SLC5A9Q2M3M2 681 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 SEZ6Q53EL9 994 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 XKR4Q5GH76 650 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 VARS2Q5ST30 1063 aaKnown RBP11.19□□□□□ -0.62
HDLBP-213ENST00000427007 RINT1Q6NUQ1 792 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 ALKAL1Q6UXT8 129 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 C1orf210Q8IVY1 113 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 C18orf25Q96B23 403 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-213ENST00000427007 ZBTB45Q96K62 511 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-213ENST00000427007 DRC1Q96MC2 740 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 ACAP3Q96P50 834 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 KIF2CQ99661 725 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 SH2B1Q9NRF2 756 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-213ENST00000427007 ARHGAP28Q9P2N2 729 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 ANKFY1Q9P2R3 1169 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 MRPS23Q9Y3D9 190 aaKnown RBP11.19□□□□□ -0.62
HDLBP-213ENST00000427007 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
HDLBP-213ENST00000427007 KANSL1LA0AUZ9 987 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms