RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 PRR23BQ6ZRT6 265 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 CELF5Q8N6W0 485 aaKnown RBP16.18■□□□□ 0.18
PDAP1-202ENST00000426447 DNASE1L2Q92874 299 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 TRMT61BQ9BVS5 477 aaKnown RBP16.18■□□□□ 0.18
PDAP1-202ENST00000426447 FZD8Q9H461 694 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 PDZD7Q9H5P4 517 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 TTC12Q9H892 705 aaPredicted RBP16.18■□□□□ 0.18
PDAP1-202ENST00000426447 ZFP14Q9HCL3 533 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 PARD6AQ9NPB6 346 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 GPRC5CQ9NQ84 441 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 MTRRQ9UBK8 725 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 GDAQ9Y2T3 454 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 FRYLO94915 3013 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 CEP250Q9BV73 2442 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 PRRG1O14668 218 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 ADRB1P08588 477 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 XRCC6P12956 609 aaKnown RBP eCLIP16.17■□□□□ 0.18
PDAP1-202ENST00000426447 ATP2B1P20020 1258 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 TXKP42681 527 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 CALCRLQ16602 461 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 MAPK6Q16659 721 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 SLC5A9Q2M3M2 681 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 LAIR1Q6GTX8 287 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 ANKS3Q6ZW76 656 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 CORO1BQ9BR76 489 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 C2orf40Q9H1Z8 148 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 CXCL16Q9H2A7 254 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 LMAN1LQ9HAT1 526 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 GJB4Q9NTQ9 266 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 BACE2Q9Y5Z0 518 aa16.17■□□□□ 0.18
PDAP1-202ENST00000426447 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.17■□□□□ 0.18
PDAP1-202ENST00000426447 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.16■□□□□ 0.18
PDAP1-202ENST00000426447 ZNF197O14709 1029 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 CEBPBP17676 345 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 TKTP29401 623 aaKnown RBP16.16■□□□□ 0.18
PDAP1-202ENST00000426447 ARPP19P56211 112 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 NAB2Q15742 525 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 FAM187BQ17R55 369 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 EARS2Q5JPH6 523 aaKnown RBP16.16■□□□□ 0.18
PDAP1-202ENST00000426447 PPM1JQ5JR12 505 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 CENPQQ7L2Z9 268 aaPredicted RBP16.16■□□□□ 0.18
PDAP1-202ENST00000426447 MCPH1Q8NEM0 835 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 NETO1Q8TDF5 533 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 FAM3CQ92520 227 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 IRF7Q92985 503 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 CHRDQ9H2X0 955 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 USP20Q9Y2K6 914 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 GPR179Q6PRD1 2367 aa16.16■□□□□ 0.18
PDAP1-202ENST00000426447 TTLL13PA6NNM8 815 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 TMEM189-UBE2V1I3L0A0 370 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 PRKCBP05771 671 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 RETP07949 1114 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 KCNA4P22459 653 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 CCR3P51677 355 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 CLCNKBP51801 687 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 SIM2Q14190 667 aaPredicted RBP16.15■□□□□ 0.18
PDAP1-202ENST00000426447 FAM78AQ5JUQ0 283 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 GLRA4Q5JXX5 417 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 CYP4A22Q5TCH4 519 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 ZNF461Q8TAF7 563 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 DEPTORQ8TB45 409 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 UROC1Q96N76 676 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 IER2Q9BTL4 223 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 CYP4F11Q9HBI6 524 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 BRMS1Q9HCU9 246 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 AVENQ9NQS1 362 aaPredicted RBP16.15■□□□□ 0.18
PDAP1-202ENST00000426447 PDRG1Q9NUG6 133 aa16.15■□□□□ 0.18
PDAP1-202ENST00000426447 CACNA1BQ00975 2339 aa16.14■□□□□ 0.18
PDAP1-202ENST00000426447 DOCK6Q96HP0 2047 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 FAM205CA6NFA0 338 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 I3L4J1 428 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 ACKR2O00590 384 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 SLC30A4O14863 429 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 DTNBO60941 627 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 IGFBP6P24592 240 aaPredicted RBP16.14■□□□□ 0.17
PDAP1-202ENST00000426447 GDI1P31150 447 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 KRT2P35908 639 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 BRCC3P46736 316 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 CXCL12P48061 93 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 RBM25P49756 843 aaKnown RBP16.14■□□□□ 0.17
PDAP1-202ENST00000426447 SCRN1Q12765 414 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 NR5A1Q13285 461 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 CDCA2Q69YH5 1023 aaPredicted RBP16.14■□□□□ 0.17
PDAP1-202ENST00000426447 MAMSTRQ6ZN01 415 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 PDZD4Q76G19 769 aaPredicted RBP16.14■□□□□ 0.17
PDAP1-202ENST00000426447 ELMOD1Q8N336 334 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 WASF1Q92558 559 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 DDX27Q96GQ7 796 aaKnown RBP16.14■□□□□ 0.17
PDAP1-202ENST00000426447 ZNF334Q9HCZ1 680 aaPredicted RBP16.14■□□□□ 0.17
PDAP1-202ENST00000426447 SEMA4GQ9NTN9 838 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 PIAS3Q9Y6X2 628 aa16.14■□□□□ 0.17
PDAP1-202ENST00000426447 PATJQ8NI35 1801 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 ARHGEF37A1IGU5 675 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 SHISA7A6NL88 538 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 LRP3O75074 770 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 PSMC3P17980 439 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 ROR1Q01973 937 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 UPP1Q16831 310 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 DCAF4L1Q3SXM0 396 aa16.13■□□□□ 0.17
PDAP1-202ENST00000426447 IQCEQ6IPM2 695 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms