RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 C17orf80Q9BSJ5 609 aa7.05□□□□□ -1.28
NIF3L1-207ENST00000426253 PSTPIP2Q9H939 334 aa7.05□□□□□ -1.28
NIF3L1-207ENST00000426253 RBM28Q9NW13 759 aaKnown RBP7.05□□□□□ -1.28
NIF3L1-207ENST00000426253 RTEL1Q9NZ71 1219 aa7.05□□□□□ -1.28
NIF3L1-207ENST00000426253 NOP53Q9NZM5 478 aaKnown RBP7.05□□□□□ -1.28
NIF3L1-207ENST00000426253 GMIPQ9P107 970 aa7.05□□□□□ -1.28
NIF3L1-207ENST00000426253 REV1Q9UBZ9 1251 aa7.05□□□□□ -1.28
NIF3L1-207ENST00000426253 CD207Q9UJ71 328 aa7.05□□□□□ -1.28
NIF3L1-207ENST00000426253 NAP1L2Q9ULW6 460 aaPredicted RBP7.05□□□□□ -1.28
NIF3L1-207ENST00000426253 CORINQ9Y5Q5 1042 aa7.05□□□□□ -1.28
NIF3L1-207ENST00000426253 SNX14Q9Y5W7 946 aa7.05□□□□□ -1.28
NIF3L1-207ENST00000426253 PTPRSQ13332 1948 aa7.05□□□□□ -1.28
NIF3L1-207ENST00000426253 KLF18A0A0U1RQI7 1052 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 hCG_1642624A0A1W2PR95 340 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 TLDC2A0PJX2 215 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 SLC22A31A6NKX4 558 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 LOC730098B7Z3J9 87 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 K7ELQ4 463 aaPredicted RBP7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 MEIS2O14770 477 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 NCK2O43639 380 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 PPFIA4O75335 1185 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 WISP1O95388 367 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 SUPT20HL2P0C7V6 817 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 SP2Q02086 613 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 ARHGAP1Q07960 439 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 PTPN21Q16825 1174 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 GNPTABQ3T906 1256 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 PRRT3Q5FWE3 981 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 CDCP2Q5VXM1 449 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 APOA5Q6Q788 366 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 BLOC1S2Q6QNY1 142 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 TMTC3Q6ZXV5 915 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 BEND7Q8N7W2 519 aaPredicted RBP7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 RNF214Q8ND24 703 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 PPP1R13LQ8WUF5 828 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 TMEM40Q8WWA1 233 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 RUBCNQ92622 972 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 RPGRIP1Q96KN7 1286 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 ALDH8A1Q9H2A2 487 aaPredicted RBP7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 ATXN3LQ9H3M9 355 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 SEMA4AQ9H3S1 761 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 MFSD1Q9H3U5 465 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 GSX1Q9H4S2 264 aaPredicted RBP7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 PIF1Q9H611 641 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 MLXIPQ9HAP2 919 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 DISC1Q9NRI5 854 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 ACTR10Q9NZ32 417 aa7.04□□□□□ -1.28
NIF3L1-207ENST00000426253 EP300Q09472 2414 aaPredicted RBP7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 MCM3APO60318 1980 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 GOLGA8AA7E2F4 631 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 GOLGA8BA8MQT2 603 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 EPB41L2O43491 1005 aaKnown RBP7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 STAM2O75886 525 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 BAIAP3O94812 1187 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 GGPS1O95749 300 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 PGRP06401 933 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 MMP3P08254 477 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 CYP2C9P11712 490 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 RPS6KB1P23443 525 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 ICAM3P32942 547 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 RFC2P35250 354 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 MRPS9P82933 396 aaKnown RBP7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 SOX4Q06945 474 aaPredicted RBP7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 ANGPT1Q15389 498 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 DGKDQ16760 1214 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 CELF3Q5SZQ8 465 aaKnown RBP7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 ZBTB37Q5TC79 503 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 ZNF746Q6NUN9 644 aaPredicted RBP7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 XRRA1Q6P2D8 792 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 NFRKBQ6P4R8 1299 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 ACAD11Q709F0 780 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 HEATR3Q7Z4Q2 680 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 ZSCAN1Q8NBB4 408 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 IL31RAQ8NI17 732 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 ZNF507Q8TCN5 953 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 BRF1Q92994 677 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 MRFAP1L1Q96HT8 127 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 FANCD2OSQ96PS1 177 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 RAD9AQ99638 391 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 CCDC113Q9H0I3 377 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 BCAS3Q9H6U6 928 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 TRMT13Q9NUP7 481 aaKnown RBP7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 PCDHA6Q9UN73 950 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 PCDHA8Q9Y5H6 950 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 R4GN57 208 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 SPTBN2O15020 2390 aa7.03□□□□□ -1.28
NIF3L1-207ENST00000426253 CCDC196A0A1B0GTZ2 297 aa7.02□□□□□ -1.29
NIF3L1-207ENST00000426253 A0A1W2PQH9 124 aa7.02□□□□□ -1.29
NIF3L1-207ENST00000426253 PRAMEF27A3QJZ7 478 aa7.02□□□□□ -1.29
NIF3L1-207ENST00000426253 SMCO2A6NFE2 343 aa7.02□□□□□ -1.29
NIF3L1-207ENST00000426253 MAFGO15525 162 aa7.02□□□□□ -1.29
NIF3L1-207ENST00000426253 FIBPO43427 364 aa7.02□□□□□ -1.29
NIF3L1-207ENST00000426253 TBX10O75333 385 aa7.02□□□□□ -1.29
NIF3L1-207ENST00000426253 CSPG5O95196 566 aa7.02□□□□□ -1.29
NIF3L1-207ENST00000426253 TIAF1O95411 115 aa7.02□□□□□ -1.29
NIF3L1-207ENST00000426253 NME1P15531 152 aaKnown RBP7.02□□□□□ -1.29
NIF3L1-207ENST00000426253 GUCY2CP25092 1073 aa7.02□□□□□ -1.29
NIF3L1-207ENST00000426253 NDUFV1P49821 464 aa7.02□□□□□ -1.29
NIF3L1-207ENST00000426253 METAP2P50579 478 aaKnown RBP eCLIP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms