RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 PSMA7O14818 248 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 IL18RAPO95256 599 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 ANKRD40Q6AI12 368 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 JADE1Q6IE81 842 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 TMEM173Q86WV6 379 aaPredicted RBP26.58■■□□□ 1.85
VEGFA-209ENST00000425836 TSPAN18Q96SJ8 248 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 FGF18O76093 207 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 ITGB1P05556 798 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 CCNE1P24864 410 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 GPM6BQ13491 265 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 EDRF1Q3B7T1 1238 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 KLHL10Q6JEL2 608 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 GDPD5Q8WTR4 605 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 RABGGTAQ92696 567 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 PAAF1Q9BRP4 392 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 GOLGA2P5Q9HBQ8 144 aa26.58■■□□□ 1.85
VEGFA-209ENST00000425836 PRG3Q9Y2Y8 225 aaPredicted RBP26.58■■□□□ 1.85
VEGFA-209ENST00000425836 CARNS1A5YM72 827 aa26.57■■□□□ 1.84
VEGFA-209ENST00000425836 NFICP08651 508 aa26.57■■□□□ 1.84
VEGFA-209ENST00000425836 NR2F2P24468 414 aa26.57■■□□□ 1.84
VEGFA-209ENST00000425836 PPM1AP35813 382 aa26.57■■□□□ 1.84
VEGFA-209ENST00000425836 KLHL40Q2TBA0 621 aa26.57■■□□□ 1.84
VEGFA-209ENST00000425836 BCL7CQ8WUZ0 217 aaPredicted RBP26.57■■□□□ 1.84
VEGFA-209ENST00000425836 PDE11AQ9HCR9 933 aa26.57■■□□□ 1.84
VEGFA-209ENST00000425836 ALG13Q9NP73 1137 aaKnown RBP26.57■■□□□ 1.84
VEGFA-209ENST00000425836 DERAQ9Y315 318 aa26.57■■□□□ 1.84
VEGFA-209ENST00000425836 CHD7Q9P2D1 2997 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 SZT2Q5T011 3432 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 TRIM49BA6NDI0 452 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 LPXNO60711 386 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 CASP4P49662 377 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 PLCB3Q01970 1234 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 ADAM9Q13443 819 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 HSP90AA2PQ14568 343 aaPredicted RBP26.56■■□□□ 1.84
VEGFA-209ENST00000425836 CAVIN1Q6NZI2 390 aaKnown RBP26.56■■□□□ 1.84
VEGFA-209ENST00000425836 SPPL3Q8TCT6 385 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 NELFBQ8WX92 580 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 IGSF21Q96ID5 467 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 TSG101Q99816 390 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 TUBGCP4Q9UGJ1 667 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 UBQLN1Q9UMX0 589 aaKnown RBP26.56■■□□□ 1.84
VEGFA-209ENST00000425836 C2CD2Q9Y426 696 aa26.56■■□□□ 1.84
VEGFA-209ENST00000425836 F8W810 466 aa26.55■■□□□ 1.84
VEGFA-209ENST00000425836 TULP1O00294 542 aaPredicted RBP26.55■■□□□ 1.84
VEGFA-209ENST00000425836 RPL13P26373 211 aaKnown RBP26.55■■□□□ 1.84
VEGFA-209ENST00000425836 NLRP12P59046 1061 aa26.55■■□□□ 1.84
VEGFA-209ENST00000425836 CYP24A1Q07973 514 aa26.55■■□□□ 1.84
VEGFA-209ENST00000425836 TMEM132DQ14C87 1099 aa26.55■■□□□ 1.84
VEGFA-209ENST00000425836 CEP135Q66GS9 1140 aa26.55■■□□□ 1.84
VEGFA-209ENST00000425836 EFCAB13Q8IY85 973 aa26.55■■□□□ 1.84
VEGFA-209ENST00000425836 TMEM130Q8N3G9 435 aa26.55■■□□□ 1.84
VEGFA-209ENST00000425836 MLKLQ8NB16 471 aa26.55■■□□□ 1.84
VEGFA-209ENST00000425836 MFSD14AQ96MC6 490 aa26.55■■□□□ 1.84
VEGFA-209ENST00000425836 MARCH5Q9NX47 278 aa26.55■■□□□ 1.84
VEGFA-209ENST00000425836 MTMR10Q9NXD2 777 aa26.55■■□□□ 1.84
VEGFA-209ENST00000425836 GRM6O15303 877 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 CYP3A5P20815 502 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 LRRC63Q05C16 580 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 SPATA1Q5VX52 437 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 UROC1Q96N76 676 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 COLEC11Q9BWP8 271 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 CTNND2Q9UQB3 1225 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 FRMD4BQ9Y2L6 1034 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 CLCNKBP51801 687 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 GUCY2FP51841 1108 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 PSMD6Q15008 389 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 UPP1Q16831 310 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 EEF2KMTQ96G04 330 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 DDX27Q96GQ7 796 aaKnown RBP26.54■■□□□ 1.84
VEGFA-209ENST00000425836 TMEM169Q96HH4 297 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 GUCD1Q96NT3 240 aa26.54■■□□□ 1.84
VEGFA-209ENST00000425836 CDX2Q99626 313 aaPredicted RBP26.54■■□□□ 1.84
VEGFA-209ENST00000425836 XPOTO43592 962 aaKnown RBP26.53■■□□□ 1.84
VEGFA-209ENST00000425836 AKAP3O75969 853 aa26.53■■□□□ 1.84
VEGFA-209ENST00000425836 FKBP3Q00688 224 aaKnown RBP26.53■■□□□ 1.84
VEGFA-209ENST00000425836 KRT17Q04695 432 aa26.53■■□□□ 1.84
VEGFA-209ENST00000425836 PAK1Q13153 545 aa26.53■■□□□ 1.84
VEGFA-209ENST00000425836 SURF1Q15526 300 aa26.53■■□□□ 1.84
VEGFA-209ENST00000425836 DPCR1Q3MIW9 517 aa26.53■■□□□ 1.84
VEGFA-209ENST00000425836 TTI2Q6NXR4 508 aa26.53■■□□□ 1.84
VEGFA-209ENST00000425836 NT5DC4Q86YG4 428 aa26.53■■□□□ 1.84
VEGFA-209ENST00000425836 ZC3H3Q8IXZ2 948 aaKnown RBP26.53■■□□□ 1.84
VEGFA-209ENST00000425836 BEST2Q8NFU1 509 aa26.53■■□□□ 1.84
VEGFA-209ENST00000425836 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.53■■□□□ 1.84
VEGFA-209ENST00000425836 CDH23Q9H251 3354 aa26.52■■□□□ 1.84
VEGFA-209ENST00000425836 CETN3O15182 167 aa26.52■■□□□ 1.84
VEGFA-209ENST00000425836 IGFBP6P24592 240 aaPredicted RBP26.52■■□□□ 1.84
VEGFA-209ENST00000425836 DNAJB1P25685 340 aa26.52■■□□□ 1.84
VEGFA-209ENST00000425836 RPL9P32969 192 aaKnown RBP26.52■■□□□ 1.84
VEGFA-209ENST00000425836 STX17P56962 302 aa26.52■■□□□ 1.84
VEGFA-209ENST00000425836 ADGRE1Q14246 886 aa26.52■■□□□ 1.84
VEGFA-209ENST00000425836 DCLRE1AQ6PJP8 1040 aa26.52■■□□□ 1.84
VEGFA-209ENST00000425836 FOXR2Q6PJQ5 311 aa26.52■■□□□ 1.84
VEGFA-209ENST00000425836 PLEKHO2Q8TD55 490 aa26.52■■□□□ 1.84
VEGFA-209ENST00000425836 POF1BQ8WVV4 589 aa26.52■■□□□ 1.84
VEGFA-209ENST00000425836 SYAP1Q96A49 352 aaPredicted RBP26.52■■□□□ 1.84
VEGFA-209ENST00000425836 CCDC127Q96BQ5 260 aa26.52■■□□□ 1.84
VEGFA-209ENST00000425836 DUSP9Q99956 384 aaKnown RBP26.52■■□□□ 1.84
VEGFA-209ENST00000425836 GZF1Q9H116 711 aaPredicted RBP26.52■■□□□ 1.84
VEGFA-209ENST00000425836 LZTS1Q9Y250 596 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms