RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 IFNAR2P48551 515 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 HMGCS2P54868 508 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 TRIP13Q15645 432 aaPredicted RBP13.88□□□□□ -0.19
COL12A1-205ENST00000425443 C1orf220Q5T0J3 134 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 DAB2IPQ5VWQ8 1189 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 SWSAP1Q6NVH7 229 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 CEP57Q86XR8 500 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 CCDC105Q8IYK2 499 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 DHX38Q92620 1227 aaKnown RBP13.88□□□□□ -0.19
COL12A1-205ENST00000425443 ATP6V0A1Q93050 837 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 ZBED3Q96IU2 234 aaPredicted RBP13.88□□□□□ -0.19
COL12A1-205ENST00000425443 WNK4Q96J92 1243 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 CCDC114Q96M63 670 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 TEPSINQ96N21 525 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 ANKEF1Q9NU02 776 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
COL12A1-205ENST00000425443 GOLGA6L7A0A1B0GV03 622 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 ZBTB7AO95365 584 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 PYGMP11217 842 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 NAT1P18440 290 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 GJC1P36383 396 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 LMBRD2Q68DH5 695 aaPredicted RBP13.88□□□□□ -0.19
COL12A1-205ENST00000425443 KRT39Q6A163 491 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 CPLX4Q7Z7G2 160 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 FUKQ8N0W3 1084 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 FAM118BQ9BPY3 351 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 PI4K2AQ9BTU6 479 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 FAM129AQ9BZQ8 928 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 PABPC3Q9H361 631 aaKnown RBP13.88□□□□□ -0.19
COL12A1-205ENST00000425443 AS3MTQ9HBK9 375 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 FZD1Q9UP38 647 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 ADRB2P07550 413 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 GMPSP49915 693 aaPredicted RBP13.88□□□□□ -0.19
COL12A1-205ENST00000425443 ADCY1Q08828 1119 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 TAX1BP1Q86VP1 789 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 C12orf56Q8IXR9 622 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 CACNA2D3Q8IZS8 1091 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 IFT74Q96LB3 600 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 NT5C1BQ96P26 610 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 YIPF2Q9BWQ6 316 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 RAB17Q9H0T7 212 aa13.88□□□□□ -0.19
COL12A1-205ENST00000425443 CNOT7Q9UIV1 285 aaKnown RBP13.88□□□□□ -0.19
COL12A1-205ENST00000425443 DIS3Q9Y2L1 958 aaKnown RBP13.88□□□□□ -0.19
COL12A1-205ENST00000425443 HGSO14964 777 aaPredicted RBP13.87□□□□□ -0.19
COL12A1-205ENST00000425443 MMEP08473 750 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 NUDT17P0C025 328 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 CHRNB2P17787 502 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 PEX5P50542 639 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 RPS6KA3P51812 740 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 RWDD2BP57060 319 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 ANO5Q75V66 913 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 SAMD3Q8N6K7 520 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 MGARPQ8TDB4 240 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 NSUN6Q8TEA1 469 aaKnown RBP13.87□□□□□ -0.19
COL12A1-205ENST00000425443 KIFAP3Q92845 792 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 CHMP6Q96FZ7 201 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 ZNFX1Q9P2E3 1918 aaKnown RBP13.87□□□□□ -0.19
COL12A1-205ENST00000425443 TP73O15350 636 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 DKC1O60832 514 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL12A1-205ENST00000425443 RTN2O75298 545 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 FDX1P10109 184 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 PDE6CP51160 858 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 NCKAP1LP55160 1127 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 BACE1P56817 501 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 SNRPFP62306 86 aaKnown RBP13.87□□□□□ -0.19
COL12A1-205ENST00000425443 LLGL2Q6P1M3 1020 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 CYB5D1Q6P9G0 228 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 LRRC34Q8IZ02 419 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 TMEM161BQ8NDZ6 487 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
COL12A1-205ENST00000425443 MLXIPLQ9NP71 852 aa13.87□□□□□ -0.19
COL12A1-205ENST00000425443 PSME4Q14997 1843 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 PSAPP07602 524 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 CREB1P16220 341 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 MMP13P45452 471 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 PRKG1Q13976 671 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 SEL1L2Q5TEA6 688 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 NOP9Q86U38 636 aaKnown RBP13.86□□□□□ -0.19
COL12A1-205ENST00000425443 ZNF280CQ8ND82 737 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 ZNF653Q96CK0 615 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 GGT7Q9UJ14 662 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 LOXHD1Q8IVV2 1947 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 PHF2O75151 1096 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 NF2P35240 595 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 SIX1Q15475 284 aaPredicted RBP13.86□□□□□ -0.19
COL12A1-205ENST00000425443 DENND2CQ68D51 928 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 VSIG10LQ86VR7 867 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 FBXL13Q8NEE6 735 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 C1orf54Q8WWF1 131 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 HVCN1Q96D96 273 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 ZSWIM1Q9BR11 485 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 FAM213AQ9BRX8 229 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 ST6GALNAC4Q9H4F1 302 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 GINM1Q9NU53 330 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 CTNNA2P26232 953 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 ADSSP30520 456 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 PLCB4Q15147 1175 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 RBBP5Q15291 538 aaKnown RBP13.86□□□□□ -0.19
COL12A1-205ENST00000425443 E2F5Q15329 346 aa13.86□□□□□ -0.19
COL12A1-205ENST00000425443 PPP2R5EQ16537 467 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms