RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ZNF568Q3ZCX4 644 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 SEZ6Q53EL9 994 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 ZPBP2Q6X784 338 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 FAM43BQ6ZT52 329 aaPredicted RBP16.95■□□□□ 0.3
SHOX2-202ENST00000425436 FRMD5Q7Z6J6 570 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 ZNF598Q86UK7 904 aaKnown RBP16.95■□□□□ 0.3
SHOX2-202ENST00000425436 NPAS4Q8IUM7 802 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 HVCN1Q96D96 273 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 ADPGKQ9BRR6 497 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 CDT1Q9H211 546 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 TMEM161AQ9NX61 479 aa16.95■□□□□ 0.3
SHOX2-202ENST00000425436 TTC26A0AVF1 554 aa16.94■□□□□ 0.3
SHOX2-202ENST00000425436 ABLIM1O14639 778 aa16.94■□□□□ 0.3
SHOX2-202ENST00000425436 CLDN3O15551 220 aa16.94■□□□□ 0.3
SHOX2-202ENST00000425436 ZNF623O75123 536 aa16.94■□□□□ 0.3
SHOX2-202ENST00000425436 EOMESO95936 686 aa16.94■□□□□ 0.3
SHOX2-202ENST00000425436 STAG3L1P0CL83 205 aa16.94■□□□□ 0.3
SHOX2-202ENST00000425436 SKIP12755 728 aa16.94■□□□□ 0.3
SHOX2-202ENST00000425436 AKAP5P24588 427 aa16.94■□□□□ 0.3
SHOX2-202ENST00000425436 GTF2F1P35269 517 aaKnown RBP eCLIP16.94■□□□□ 0.3
SHOX2-202ENST00000425436 ETF1P62495 437 aaKnown RBP16.94■□□□□ 0.3
SHOX2-202ENST00000425436 MPZL3Q6UWV2 235 aa16.94■□□□□ 0.3
SHOX2-202ENST00000425436 MRPL10Q7Z7H8 261 aaKnown RBP16.94■□□□□ 0.3
SHOX2-202ENST00000425436 REXO1L1PQ8IX06 675 aa16.94■□□□□ 0.3
SHOX2-202ENST00000425436 CEP120Q8N960 986 aa16.94■□□□□ 0.3
SHOX2-202ENST00000425436 NUCKS1Q9H1E3 243 aaKnown RBP16.94■□□□□ 0.3
SHOX2-202ENST00000425436 ELAC1Q9H777 363 aaKnown RBP16.94■□□□□ 0.3
SHOX2-202ENST00000425436 EXOC7Q9UPT5 735 aa16.94■□□□□ 0.3
SHOX2-202ENST00000425436 DYNC1I1O14576 645 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 SLC16A3O15427 465 aaKnown RBP16.93■□□□□ 0.3
SHOX2-202ENST00000425436 TLL1O43897 1013 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 DGKIO75912 1065 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 PIGRP01833 764 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 ITGA4P13612 1032 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 RAB27AP51159 221 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 CDK17Q00537 523 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 MYBPC2Q14324 1141 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 AGMOQ6ZNB7 445 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 TMEM192Q8IY95 271 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 THNSL1Q8IYQ7 743 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 YME1L1Q96TA2 773 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 TMEM206Q9H813 350 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 RNF19AQ9NV58 838 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 SNTG2Q9NY99 539 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 KLK14Q9P0G3 267 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 CGNQ9P2M7 1197 aaKnown RBP16.93■□□□□ 0.3
SHOX2-202ENST00000425436 PARP2Q9UGN5 583 aa16.93■□□□□ 0.3
SHOX2-202ENST00000425436 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.93■□□□□ 0.3
SHOX2-202ENST00000425436 ZMYM2Q9UBW7 1377 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 UQCRHLA0A096LP55 91 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 A0A1W2PPC1 479 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 LCHNA4D1U4 455 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 UQCRHP07919 91 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 NR2F2P24468 414 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 ADSSP30520 456 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 AFF1P51825 1210 aaKnown RBP16.92■□□□□ 0.3
SHOX2-202ENST00000425436 DCAF4L1Q3SXM0 396 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 PAN2Q504Q3 1202 aaKnown RBP16.92■□□□□ 0.3
SHOX2-202ENST00000425436 CLLU1OSQ5K130 101 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 TRIM59Q8IWR1 403 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 CCDC170Q8IYT3 715 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 HELQQ8TDG4 1101 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 PGBD4Q96DM1 585 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 RAD9AQ99638 391 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 PBX4Q9BYU1 374 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 TTYH3Q9C0H2 523 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 ADGRG1Q9Y653 693 aa16.92■□□□□ 0.3
SHOX2-202ENST00000425436 TBKBP1A7MCY6 615 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 TGFB1I1O43294 461 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 MCF2P10911 925 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 EPB41P11171 864 aaKnown RBP16.91■□□□□ 0.3
SHOX2-202ENST00000425436 SNRPFP62306 86 aaKnown RBP16.91■□□□□ 0.3
SHOX2-202ENST00000425436 MCL1Q07820 350 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 MEA1Q16626 185 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 FNDC1Q4ZHG4 1894 aaPredicted RBP16.91■□□□□ 0.3
SHOX2-202ENST00000425436 ZBTB41Q5SVQ8 909 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 HS2ST1Q7LGA3 356 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 ZSWIM2Q8NEG5 633 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 POMGNT1Q8WZA1 660 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 ZNF592Q92610 1267 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 EEF2KMTQ96G04 330 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 MSTO1Q9BUK6 570 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 CXCL16Q9H2A7 254 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 PCIF1Q9H4Z3 704 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 INPP5FQ9Y2H2 1132 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 SIK3Q9Y2K2 1263 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 YBX2Q9Y2T7 364 aaKnown RBP16.91■□□□□ 0.3
SHOX2-202ENST00000425436 INSL6Q9Y581 213 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 A0A0B4J269 797 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 SOWAHDA6NJG2 315 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 CLIC2O15247 247 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 HNRNPH3P31942 346 aaKnown RBP16.91■□□□□ 0.3
SHOX2-202ENST00000425436 KRT83P78385 493 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 HTRA4P83105 476 aaPredicted RBP16.91■□□□□ 0.3
SHOX2-202ENST00000425436 LRIT3Q3SXY7 679 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 SLFN12LQ6IEE8 588 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 TOGARAM2Q6ZUX3 1019 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 APBB1IPQ7Z5R6 666 aaPredicted RBP16.91■□□□□ 0.3
SHOX2-202ENST00000425436 NEK11Q8NG66 645 aa16.91■□□□□ 0.3
SHOX2-202ENST00000425436 TMEM174Q8WUU8 243 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms