RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 TAOK3Q9H2K8 898 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 DNAJC18Q9H819 358 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 NINJ2Q9NZG7 142 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 BZW2Q9Y6E2 419 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 SLC4A7Q9Y6M7 1214 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 FAM47DPA6NHR8 397 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 BANF1O75531 89 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 PTPN4P29074 926 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 GJC1P36383 396 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 MOGSQ13724 837 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 RNF207Q6ZRF8 634 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 CLNKQ7Z7G1 428 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 SFR1Q86XK3 245 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 DGKHQ86XP1 1220 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 UPF1Q92900 1129 aaKnown RBP eCLIP12.01□□□□□ -0.497e-17■■■■■ 87.7
SEC61A1-202ENST00000424880 FAM161BQ96MY7 647 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 SERPINB12Q96P63 405 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 TIPINQ9BVW5 301 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 STK17AQ9UEE5 414 aa12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 TTC7AQ9ULT0 858 aaPredicted RBP12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 TDRKHQ9Y2W6 561 aaKnown RBP12.01□□□□□ -0.49
SEC61A1-202ENST00000424880 BCORQ6W2J9 1755 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 PODXLO00592 558 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 GSC2O15499 205 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 SERPINB3P29508 390 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 FASTKD3Q14CZ7 662 aaKnown RBP12□□□□□ -0.49
SEC61A1-202ENST00000424880 OLIG1Q8TAK6 271 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 SLC35C1Q96A29 364 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 MPP4Q96JB8 637 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 ZNF184Q99676 751 aaPredicted RBP12□□□□□ -0.49
SEC61A1-202ENST00000424880 HERPUD2Q9BSE4 406 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 HEY2Q9UBP5 337 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 PCDHA12Q9UN75 941 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 PCDHA2Q9Y5H9 948 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 DUOX1Q9NRD9 1551 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 FOXN3O00409 490 aaPredicted RBP12□□□□□ -0.49
SEC61A1-202ENST00000424880 NTSR2O95665 410 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 ZBTB16Q05516 673 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 CBWD6Q4V339 395 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 ARSHQ5FYA8 562 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 CBWD3Q5JTY5 395 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 CBWD5Q5RIA9 395 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 SEL1L2Q5TEA6 688 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 TRMT1LQ7Z2T5 733 aaKnown RBP12□□□□□ -0.49
SEC61A1-202ENST00000424880 BRIP1Q9BX63 1249 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
SEC61A1-202ENST00000424880 SH3GLB2Q9NR46 395 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 SERPINA10Q9UK55 444 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 MROH7Q68CQ1 1323 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 PASKQ96RG2 1323 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 COL4A1P02462 1669 aa12□□□□□ -0.49
SEC61A1-202ENST00000424880 TTLL1O95922 423 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 GRIA2P42262 883 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 TTLL12Q14166 644 aaPredicted RBP11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 MAPK6Q16659 721 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 CCDC152Q4G0S7 254 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 TBC1D10BQ4KMP7 808 aaPredicted RBP11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 SGO2Q562F6 1265 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 WASHC2DQ5SRD0 308 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 LLGL2Q6P1M3 1020 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 PAOXQ6QHF9 649 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 CCDC65Q8IXS2 484 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 C10orf82Q8WW14 230 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 SLC5A5Q92911 643 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 CEP63Q96MT8 703 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 EBF3Q9H4W6 596 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 TXNDC9O14530 226 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 SUPT3HO75486 399 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 GCNT3O95395 438 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 RRM1P23921 792 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 CETN2P41208 172 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 CCDC15Q0P6D6 951 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 CROCCP2Q86T23 111 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 LRRC6Q86X45 466 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 HAS1Q92839 578 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 RUNDC3BQ96NL0 473 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 TMEM109Q9BVC6 243 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 HEMK1Q9Y5R4 338 aaPredicted RBP11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 MYOCOSA0A1B0GUC4 107 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 GOLGA8SH3BPF8 625 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 GOLGA8MH3BSY2 632 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 ASMTLO95671 621 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 CYP11B2P19099 503 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 SOX5P35711 763 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 CYP2J2P51589 502 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 DRG2P55039 364 aaKnown RBP11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 JAM2P57087 298 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 BTKQ06187 659 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 GRM4Q14833 912 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 LIN52Q52LA3 116 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 ZNF444Q8N0Y2 327 aaPredicted RBP11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 UBL4BQ8N7F7 174 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 ARL10Q8N8L6 244 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 SLC30A5Q8TAD4 765 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 LZICQ8WZA0 190 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 USP6NLQ92738 828 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 INPP5DQ92835 1189 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 ZSWIM1Q9BR11 485 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms