RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 TMEM41AQ96HV5 264 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 ZC3H10Q96K80 434 aaKnown RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 SPATA17Q96L03 361 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 ZSWIM3Q96MP5 696 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 WRNIP1Q96S55 665 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 SDF4Q9BRK5 362 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 ANP32EQ9BTT0 268 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PHF20Q9BVI0 1012 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 SMOC1Q9H4F8 434 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 JMJD4Q9H9V9 463 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 CYP4F11Q9HBI6 524 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 VTA1Q9NP79 307 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 CABP5Q9NP86 173 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 DMRT3Q9NQL9 472 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 OLA1Q9NTK5 396 aaKnown RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 SMPD4Q9NXE4 827 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 DCAF16Q9NXF7 216 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 IFT80Q9P2H3 777 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 MAGED2Q9UNF1 606 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PA2G4Q9UQ80 394 aaKnown RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 TRAF6Q9Y4K3 522 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PCDHGA9Q9Y5G4 932 aaKnown RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PCDHGA8Q9Y5G5 932 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PCDHGA7Q9Y5G6 932 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PCDHGA6Q9Y5G7 932 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PCDHGA3Q9Y5H0 932 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PCDHGA2Q9Y5H1 932 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 NPFFR2Q9Y5X5 522 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 IKBKGQ9Y6K9 419 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 A0A087X0M5 115 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 A0A1B0GX30 115 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 C9orf118A6NHY6 69 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 A6NLC8 198 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 MASP2O00187 686 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 FOXN3O00409 490 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-205ENST00000424674 DDX3XO00571 662 aaKnown RBP eCLIP4.19□□□□□ -1.74
SF3B1-205ENST00000424674 AQP7O14520 342 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 TADA3O75528 432 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 SKAP2O75563 359 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-205ENST00000424674 PLATP00750 562 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 DNTTP04053 509 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 ZNF28P17035 718 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 RPL17P18621 184 aaKnown RBP4.19□□□□□ -1.74
SF3B1-205ENST00000424674 ANP32AP39687 249 aaKnown RBP4.19□□□□□ -1.74
SF3B1-205ENST00000424674 NPTX2P47972 431 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 MAN2A2P49641 1150 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 PRIM2P49643 509 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 MAPK10P53779 464 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 ADKP55263 362 aaKnown RBP4.19□□□□□ -1.74
SF3B1-205ENST00000424674 DCAF7P61962 342 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 PPP2R5CQ13362 524 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 LRRC32Q14392 662 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 STARD3Q14849 445 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 CLUL1Q15846 466 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 ZXDCQ2QGD7 858 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-205ENST00000424674 RNF220Q5VTB9 566 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 KRT74Q7RTS7 529 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 IQCA1Q86XH1 822 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 NRSN1Q8IZ57 195 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 KIAA0319LQ8IZA0 1049 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 CAMKK1Q8N5S9 505 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 ESX1Q8N693 406 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 ZNF527Q8NB42 609 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 ZMIZ2Q8NF64 920 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 PHOSPHO1Q8TCT1 267 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 IPCEF1Q8WWN9 437 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-205ENST00000424674 N4BP2L2Q92802 583 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-205ENST00000424674 KIAA1191Q96A73 305 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 C1GALT1C1Q96EU7 318 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 RADILQ96JH8 1075 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 LCORQ96JN0 433 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-205ENST00000424674 CLIC6Q96NY7 704 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 ASB2Q96Q27 587 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 RBM15Q96T37 977 aaKnown RBP eCLIP4.19□□□□□ -1.74
SF3B1-205ENST00000424674 KCNJ15Q99712 375 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 APOL5Q9BWW9 433 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 STK31Q9BXU1 1019 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 BTBD1Q9H0C5 482 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 DEF6Q9H4E7 631 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 STARD7Q9NQZ5 370 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 GPR27Q9NS67 375 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 ABCF3Q9NUQ8 709 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 MYOTQ9UBF9 498 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 MTRRQ9UBK8 725 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 RABL2BQ9UNT1 228 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 ASXL2Q76L83 1435 aa4.19□□□□□ -1.74
SF3B1-205ENST00000424674 RHPN2P1A8MT19 583 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 INO80B-WBP1J3KQ70 363 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 KRIT1O00522 736 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 P4HA2O15460 535 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 DTNBO60941 627 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 MAFO75444 373 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-205ENST00000424674 CYP7B1O75881 506 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 GLRX3O76003 335 aaKnown RBP4.18□□□□□ -1.74
SF3B1-205ENST00000424674 CYP1A1P04798 512 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-205ENST00000424674 APOA4P06727 396 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 MYBP10242 640 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 MTHFD1P11586 935 aaKnown RBP4.18□□□□□ -1.74
SF3B1-205ENST00000424674 COL6A2P12110 1019 aa4.18□□□□□ -1.74
SF3B1-205ENST00000424674 AKR1B1P15121 316 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms