RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 RASSF9O75901 435 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 SNUPNO95149 360 aaKnown RBP12.72□□□□□ -0.37
LAMA4-207ENST00000424408 FKBP9O95302 570 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 SLC1A1P43005 524 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 FKBP9P1Q75LS8 142 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 KIRREL3Q8IZU9 778 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 CNDP1Q96KN2 507 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 OSBPL8Q9BZF1 889 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 GPBP1L1Q9HC44 474 aaPredicted RBP12.72□□□□□ -0.37
LAMA4-207ENST00000424408 SERPINB13Q9UIV8 391 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 ZNF518AQ6AHZ1 1483 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 KAT6BQ8WYB5 2073 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 CYTH3O43739 400 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 USP1O94782 785 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 RASGRF1Q13972 1273 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 STXBP2Q15833 593 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 RCOR2Q8IZ40 523 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 PLEKHG3A1L390 1219 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 SPDYE5A6NIY4 337 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 TRIM49P0CI25 452 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 TRIM49CP0CI26 452 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 NFKBIAP25963 317 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 AP3B2Q13367 1082 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 FAM98CQ17RN3 349 aaKnown RBP12.72□□□□□ -0.37
LAMA4-207ENST00000424408 SPDYE7PQ495Y7 208 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 SPDYAQ5MJ70 313 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 C6orf10Q5SRN2 563 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 PID1Q7Z2X4 250 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 NMD3Q96D46 503 aaKnown RBP12.72□□□□□ -0.37
LAMA4-207ENST00000424408 MTERF3Q96E29 417 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 CEP95Q96GE4 821 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 ORAI2Q96SN7 254 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 VCPKMTQ9H867 229 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 DONSONQ9NYP3 566 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 FAM32AQ9Y421 112 aaKnown RBP12.72□□□□□ -0.37
LAMA4-207ENST00000424408 SHANK2Q9UPX8 1470 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 USP17L5A8MUK1 530 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 C5orf58C9J3I9 102 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 UBAP1LF5GYI3 381 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
LAMA4-207ENST00000424408 ADORA2BP29275 332 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
LAMA4-207ENST00000424408 LRRC34Q8IZ02 419 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 PCYOX1LQ8NBM8 494 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 KLF6Q99612 283 aaPredicted RBP12.72□□□□□ -0.37
LAMA4-207ENST00000424408 TASP1Q9H6P5 420 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 HPS4Q9NQG7 708 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 GCC2Q8IWJ2 1684 aa12.72□□□□□ -0.37
LAMA4-207ENST00000424408 CYP26A1O43174 497 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 DCAF4L1Q3SXM0 396 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 TTC39BQ5VTQ0 682 aaPredicted RBP12.71□□□□□ -0.37
LAMA4-207ENST00000424408 ZSCAN32Q9NX65 697 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 EMSYQ7Z589 1322 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 A0A1B0GTH6 734 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 SASH1O94885 1247 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 KRT16P08779 473 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 STAT3P40763 770 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 CHI3L2Q15782 390 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 FAM180AQ6UWF9 173 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 LAYNQ6UX15 382 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 OMA1Q96E52 524 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 ZC3H7BQ9UGR2 993 aaKnown RBP12.71□□□□□ -0.37
LAMA4-207ENST00000424408 LEMD3Q9Y2U8 911 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 POTEFA5A3E0 1075 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 ALBP02768 609 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 POTEIP0CG38 1075 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 TAP1Q03518 808 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 PTPN12Q05209 780 aaKnown RBP12.71□□□□□ -0.37
LAMA4-207ENST00000424408 KIZQ2M2Z5 673 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 POTEGQ6S5H5 508 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 POTEEQ6S8J3 1075 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 TMC5Q6UXY8 1006 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 TRIM72Q6ZMU5 477 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 THEM5Q8N1Q8 247 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 AP4S1Q9Y587 144 aa12.71□□□□□ -0.37
LAMA4-207ENST00000424408 LINC00854A0A1B0GVQ3 168 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 CCDC78A2IDD5 438 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 DENND3A2RUS2 1198 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 RNF103O00237 685 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 PDHBP11177 359 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 SCTRP47872 440 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 HSPA2P54652 639 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 TNFAIP2Q03169 654 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 LRRC74AQ0VAA2 488 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 METTL16Q86W50 562 aaKnown RBP12.71□□□□□ -0.38
LAMA4-207ENST00000424408 RIN3Q8TB24 985 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 GLMNQ92990 594 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 ROPN1BQ9BZX4 212 aaPredicted RBP12.71□□□□□ -0.38
LAMA4-207ENST00000424408 ROPN1Q9HAT0 212 aaPredicted RBP12.71□□□□□ -0.38
LAMA4-207ENST00000424408 LOC100653049A0A140TA62 436 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 KRT34O76011 436 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 TPP2P29144 1249 aaPredicted RBP12.71□□□□□ -0.38
LAMA4-207ENST00000424408 ACTR2P61160 394 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 KDM7AQ6ZMT4 941 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 SH3KBP1Q96B97 665 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 TRIM54Q9BYV2 358 aa12.71□□□□□ -0.38
LAMA4-207ENST00000424408 MYO3BQ8WXR4 1341 aa12.7□□□□□ -0.38
LAMA4-207ENST00000424408 KCNJ6P48051 423 aa12.7□□□□□ -0.38
LAMA4-207ENST00000424408 SERPINB9P50453 376 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms