RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 V9GYQ6 96 aa11.7□□□□□ -0.54
TNC-203ENST00000423613 USP27XA6NNY8 438 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 ZNF839A8K0R7 811 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 SMNDC1O75940 238 aaKnown RBP eCLIP11.69□□□□□ -0.54
TNC-203ENST00000423613 CASP1P29466 404 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 HOXA7P31268 230 aaPredicted RBP11.69□□□□□ -0.54
TNC-203ENST00000423613 KRT76Q01546 638 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 TTC23LQ6PF05 361 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 UTS2BQ765I0 119 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 DHX38Q92620 1227 aaKnown RBP11.69□□□□□ -0.54
TNC-203ENST00000423613 PODXLO00592 558 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 NCK2O43639 380 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 CDC27P30260 824 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 PEX3P56589 373 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 ALCAMQ13740 583 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 KHDRBS2Q5VWX1 349 aaKnown RBP11.69□□□□□ -0.54
TNC-203ENST00000423613 ERICH1Q86X53 443 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 RHOT2Q8IXI1 618 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 SH2D3CQ8N5H7 860 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 GRAMD1AQ96CP6 724 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 RAVER2Q9HCJ3 691 aaKnown RBP11.69□□□□□ -0.54
TNC-203ENST00000423613 SH3GLB2Q9NR46 395 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 C20orf96Q9NUD7 363 aaPredicted RBP11.69□□□□□ -0.54
TNC-203ENST00000423613 TBKBP1A7MCY6 615 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 PDZK1P1A8MUH7 402 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 TRIM24O15164 1050 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 PSMA2P25787 234 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 NR1H3Q13133 447 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 KLHL38Q2WGJ6 581 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 ZFATQ9P243 1243 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 NEDD4P46934 1319 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 ERVV-1B6SEH8 477 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 FAM160B2Q86V87 743 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 CALML6Q8TD86 181 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 STRBPQ96SI9 672 aaKnown RBP11.69□□□□□ -0.54
TNC-203ENST00000423613 IL1RAPL1Q9NZN1 696 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 DNAJC12Q9UKB3 198 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 TTC7AQ9ULT0 858 aaPredicted RBP11.69□□□□□ -0.54
TNC-203ENST00000423613 USP6P35125 1406 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.69□□□□□ -0.54
TNC-203ENST00000423613 ASMTLO95671 621 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 FGFR4P22455 802 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 CORO7P57737 925 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 SLC10A5Q5PT55 438 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 TAF8Q7Z7C8 310 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 TBC1D10CQ8IV04 446 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 PIGOQ8TEQ8 1089 aa11.69□□□□□ -0.54
TNC-203ENST00000423613 CAPN15O75808 1086 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 CACNB3P54284 484 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 OTUD4Q01804 1114 aaKnown RBP11.68□□□□□ -0.54
TNC-203ENST00000423613 COX10Q12887 443 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 UNC13DQ70J99 1090 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 TINF2Q9BSI4 451 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 UNC45AQ9H3U1 944 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 GOLPH3LQ9H4A5 285 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 FAM153AQ9UHL3 310 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 TNPO2O14787 897 aaKnown RBP11.68□□□□□ -0.54
TNC-203ENST00000423613 ARIH2O95376 493 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 SURF1Q15526 300 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 STXBP2Q15833 593 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 SUSD4Q5VX71 490 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 RCSD1Q6JBY9 416 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 LRRC31Q6UY01 552 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 RNF135Q8IUD6 432 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 HEMGNQ9BXL5 484 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 ABHD10Q9NUJ1 306 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 HOXC10Q9NYD6 342 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 HDAC6Q9UBN7 1215 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 KRT87PA6NCN2 255 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 MTRF1O75570 445 aaKnown RBP11.68□□□□□ -0.54
TNC-203ENST00000423613 CYP2D6P10635 497 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 THEMIS2Q5TEJ8 643 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 C11orf88Q6PI97 169 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 SARM1Q6SZW1 724 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 C19orf18Q8NEA5 215 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 COG1Q8WTW3 980 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 FSD1LQ9BXM9 530 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 DMAP1Q9NPF5 467 aaPredicted RBP11.68□□□□□ -0.54
TNC-203ENST00000423613 TMEM94Q12767 1356 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 HUS1O60921 280 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 KRT38O76015 456 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 COG2Q14746 738 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 VEPH1Q14D04 833 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 PPM1NQ8N819 430 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 SH3RF3Q8TEJ3 882 aaPredicted RBP11.68□□□□□ -0.54
TNC-203ENST00000423613 MIEF2Q96C03 454 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 ZNF668Q96K58 619 aaPredicted RBP11.68□□□□□ -0.54
TNC-203ENST00000423613 DDX18Q9NVP1 670 aaKnown RBP11.68□□□□□ -0.54
TNC-203ENST00000423613 CEP72Q9P209 647 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 POTEMA6NI47 508 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 K7ERI5 159 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 GJA8P48165 433 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 ZNF157P51786 506 aaPredicted RBP11.68□□□□□ -0.54
TNC-203ENST00000423613 ADARP55265 1226 aaKnown RBP11.68□□□□□ -0.54
TNC-203ENST00000423613 MAPRE2Q15555 327 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 DNAL1Q4LDG9 190 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 ARMC3Q5W041 872 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 CYB5D1Q6P9G0 228 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 HPS5Q9UPZ3 1129 aa11.68□□□□□ -0.54
TNC-203ENST00000423613 CCDC188H7C350 402 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms