RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 TIPINQ9BVW5 301 aa20.27■□□□□ 0.84
SREBF1-206ENST00000423161 C17orf75Q9HAS0 396 aa20.27■□□□□ 0.84
SREBF1-206ENST00000423161 PTPRHQ9HD43 1115 aa20.27■□□□□ 0.84
SREBF1-206ENST00000423161 MTRRQ9UBK8 725 aa20.27■□□□□ 0.84
SREBF1-206ENST00000423161 WNT16Q9UBV4 365 aa20.27■□□□□ 0.84
SREBF1-206ENST00000423161 SFI1A8K8P3 1242 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 CCL16O15467 120 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 TRAPPC3O43617 180 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 PI15O43692 258 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 GFRA3O60609 400 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 XYLBO75191 536 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 SRFP11831 508 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 GUCY2CP25092 1073 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 TKTP29401 623 aaKnown RBP20.26■□□□□ 0.83
SREBF1-206ENST00000423161 HOXA9P31269 272 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 NTHL1P78549 312 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 SOX4Q06945 474 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-206ENST00000423161 RAD51AP2Q09MP3 1159 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 HTR4Q13639 388 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 RAB33AQ14088 237 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 XKR4Q5GH76 650 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 CD300LGQ6UXG3 332 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 SLC7A14Q8TBB6 771 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 DDX27Q96GQ7 796 aaKnown RBP20.26■□□□□ 0.83
SREBF1-206ENST00000423161 TMX3Q96JJ7 454 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 SNX27Q96L92 541 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 RTP3Q9BQQ7 232 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 TCHPQ9BT92 498 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 SLC38A7Q9NVC3 462 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 POLIQ9UNA4 740 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 USP34Q70CQ2 3546 aa20.26■□□□□ 0.83
SREBF1-206ENST00000423161 ANHXE9PGG2 379 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 H3BQV1 296 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 I3L4J1 428 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 MCF2P10911 925 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 HARSP12081 509 aaKnown RBP20.25■□□□□ 0.83
SREBF1-206ENST00000423161 PROZP22891 400 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 GJB2P29033 226 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 BRCC3P46736 316 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 HYIQ5T013 277 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 AXDND1Q5T1B0 1012 aaPredicted RBP20.25■□□□□ 0.83
SREBF1-206ENST00000423161 MPZL3Q6UWV2 235 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 ALKAL1Q6UXT8 129 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 ACAP3Q96P50 834 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 PNMA5Q96PV4 448 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 PLIN2Q99541 437 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 CA14Q9ULX7 337 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 CDY1Q9Y6F8 540 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 ZFP37Q9Y6Q3 630 aaPredicted RBP20.25■□□□□ 0.83
SREBF1-206ENST00000423161 NUMBLQ9Y6R0 609 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 MIA3Q5JRA6 1907 aa20.25■□□□□ 0.83
SREBF1-206ENST00000423161 KRBA1A5PL33 1030 aa20.24■□□□□ 0.83
SREBF1-206ENST00000423161 VWA3AA6NCI4 1184 aa20.24■□□□□ 0.83
SREBF1-206ENST00000423161 STK25O00506 426 aa20.24■□□□□ 0.83
SREBF1-206ENST00000423161 ABLIM1O14639 778 aa20.24■□□□□ 0.83
SREBF1-206ENST00000423161 CD2BP2O95400 341 aaKnown RBP20.24■□□□□ 0.83
SREBF1-206ENST00000423161 RFX1P22670 979 aa20.24■□□□□ 0.83
SREBF1-206ENST00000423161 STRN3Q13033 797 aa20.24■□□□□ 0.83
SREBF1-206ENST00000423161 RSPO2Q6UXX9 243 aaPredicted RBP20.24■□□□□ 0.83
SREBF1-206ENST00000423161 ANKS3Q6ZW76 656 aa20.24■□□□□ 0.83
SREBF1-206ENST00000423161 ST13P5Q8NFI4 369 aaPredicted RBP20.24■□□□□ 0.83
SREBF1-206ENST00000423161 CDK5RAP3Q96JB5 506 aa20.24■□□□□ 0.83
SREBF1-206ENST00000423161 ZMAT2Q96NC0 199 aaKnown RBP20.24■□□□□ 0.83
SREBF1-206ENST00000423161 CDH7Q9ULB5 785 aa20.24■□□□□ 0.83
SREBF1-206ENST00000423161 BACE2Q9Y5Z0 518 aa20.24■□□□□ 0.83
SREBF1-206ENST00000423161 PODXLO00592 558 aa20.23■□□□□ 0.83
SREBF1-206ENST00000423161 PLS3P13797 630 aa20.23■□□□□ 0.83
SREBF1-206ENST00000423161 KCNE1P15382 129 aa20.23■□□□□ 0.83
SREBF1-206ENST00000423161 SMTNP53814 917 aa20.23■□□□□ 0.83
SREBF1-206ENST00000423161 UVSSAQ2YD98 709 aa20.23■□□□□ 0.83
SREBF1-206ENST00000423161 CCDC105Q8IYK2 499 aa20.23■□□□□ 0.83
SREBF1-206ENST00000423161 KCTD17Q8N5Z5 321 aa20.23■□□□□ 0.83
SREBF1-206ENST00000423161 SYT2Q8N9I0 419 aaPredicted RBP20.23■□□□□ 0.83
SREBF1-206ENST00000423161 GPR152Q8TDT2 470 aa20.23■□□□□ 0.83
SREBF1-206ENST00000423161 SPIRE2Q8WWL2 714 aa20.23■□□□□ 0.83
SREBF1-206ENST00000423161 ZBTB45Q96K62 511 aaPredicted RBP20.23■□□□□ 0.83
SREBF1-206ENST00000423161 NTPCRQ9BSD7 190 aaKnown RBP20.23■□□□□ 0.83
SREBF1-206ENST00000423161 CNTN3Q9P232 1028 aa20.23■□□□□ 0.83
SREBF1-206ENST00000423161 ANKFY1Q9P2R3 1169 aa20.23■□□□□ 0.83
SREBF1-206ENST00000423161 PROB1E7EW31 1015 aa20.22■□□□□ 0.83
SREBF1-206ENST00000423161 POU2F2P09086 479 aa20.22■□□□□ 0.83
SREBF1-206ENST00000423161 NBL1P41271 181 aa20.22■□□□□ 0.83
SREBF1-206ENST00000423161 SLC12A3P55017 1021 aa20.22■□□□□ 0.83
SREBF1-206ENST00000423161 NOLC1Q14978 699 aaKnown RBP eCLIP20.22■□□□□ 0.83
SREBF1-206ENST00000423161 ARL6IP4Q66PJ3 421 aaKnown RBP20.22■□□□□ 0.83
SREBF1-206ENST00000423161 TMEM161BQ8NDZ6 487 aa20.22■□□□□ 0.83
SREBF1-206ENST00000423161 TBC1D17Q9HA65 648 aa20.22■□□□□ 0.83
SREBF1-206ENST00000423161 UPF2Q9HAU5 1272 aaKnown RBP20.22■□□□□ 0.83
SREBF1-206ENST00000423161 HCFC1R1Q9NWW0 138 aa20.22■□□□□ 0.83
SREBF1-206ENST00000423161 KCNG1Q9UIX4 513 aa20.22■□□□□ 0.83
SREBF1-206ENST00000423161 TOM1L1O75674 476 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 PLA2G4BP0C869 781 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 MAPTP10636 758 aaKnown RBP20.21■□□□□ 0.83
SREBF1-206ENST00000423161 TMEM119Q4V9L6 283 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 PARM1Q6UWI2 310 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 RTL10Q7L3V2 364 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 DTWD2Q8NBA8 298 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 ITFG1Q8TB96 612 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 FGF13Q92913 245 aa20.21■□□□□ 0.83
SREBF1-206ENST00000423161 FGF14Q92915 247 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms