RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 C3orf62Q6ZUJ4 267 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 NSUN6Q8TEA1 469 aaKnown RBP18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 RNF139Q8WU17 664 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 L3MBTL1Q9Y468 752 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 NEMP1O14524 444 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 SNRNP35Q16560 246 aaKnown RBP18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 WDR72Q3MJ13 1102 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 DHX38Q92620 1227 aaKnown RBP18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 ARHGAP10A1A4S6 786 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 ATP9BO43861 1147 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 SCTRP47872 440 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 SPP2Q13103 211 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 MAPK7Q13164 816 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 LOC100653049A0A140TA62 436 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 KCNN4O15554 427 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 C21orf2O43822 256 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 SLC37A4O43826 429 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 KRT34O76011 436 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 SFNP31947 248 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 OVGP1Q12889 678 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 STXBP2Q15833 593 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 RARS2Q5T160 578 aaKnown RBP18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 C18orf8Q96DM3 657 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 TUFT1Q9NNX1 390 aa18.5■□□□□ 0.55
TRAPPC10-203ENST00000422875 HNRNPCP07910 306 aaKnown RBP eCLIP18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 UBTFL6P0CB48 400 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 TRIP10Q15642 601 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 CNGA3Q16281 694 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 PID1Q7Z2X4 250 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 ARHGAP18Q8N392 663 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 ATG4AQ8WYN0 398 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 NCLNQ969V3 563 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 ROPN1BQ9BZX4 212 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 EHD4Q9H223 541 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 ROPN1Q9HAT0 212 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 LCMT1Q9UIC8 334 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 SERPINB4P48594 390 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 PMS1P54277 932 aaKnown RBP18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 FASTKD1Q53R41 847 aaKnown RBP18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 ZC3H7BQ9UGR2 993 aaKnown RBP18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 DAGLAQ9Y4D2 1042 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 NDUFB10O96000 172 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 COILP38432 576 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 NTRK3Q16288 839 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 DUOXA2Q1HG44 320 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 SYDE1Q6ZW31 735 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 PODNQ7Z5L7 613 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 DCPSQ96C86 337 aaKnown RBP18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 PI4K2AQ9BTU6 479 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 FSD1LQ9BXM9 530 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 PCDHA10Q9Y5I2 948 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 CCDC78A2IDD5 438 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 METTL23Q86XA0 190 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 PRPF38AQ8NAV1 312 aaKnown RBP18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 SYN2Q92777 582 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 MTMR8Q96EF0 704 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 MCEEQ96PE7 176 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 FEM1BQ9UK73 627 aa18.49■□□□□ 0.55
TRAPPC10-203ENST00000422875 H3BRJ5 948 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 SEC24DO94855 1032 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 C2CD6Q53TS8 623 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 AGAP3Q96P47 875 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 CACYBPQ9HB71 228 aaKnown RBP18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 IRAK4Q9NWZ3 460 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 INO80Q9ULG1 1556 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 MYO3AQ8NEV4 1616 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 STX3Q13277 289 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 EFTUD2Q15029 972 aaKnown RBP eCLIP18.48■□□□□ 0.552e-15■■■■■ 41.9
TRAPPC10-203ENST00000422875 KRT27Q7Z3Y8 459 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 SEMA6BQ9H3T3 888 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 ZNF302Q9NR11 478 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 PCMTD2Q9NV79 361 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 CPS1P31327 1500 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 E2F8A0AVK6 867 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 RALAP11233 206 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 GRB10Q13322 594 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 DSTYKQ6XUX3 929 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 ILDR1Q86SU0 546 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 SLC13A5Q86YT5 568 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 ZBTB12Q9Y330 459 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 RCOR2Q8IZ40 523 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 KBTBD4Q9NVX7 518 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 RAB21Q9UL25 225 aa18.48■□□□□ 0.55
TRAPPC10-203ENST00000422875 OSBPP22059 807 aa18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 RSPH3Q86UC2 560 aa18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 PRPF31Q8WWY3 499 aaKnown RBP18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 TMBIM4Q9HC24 238 aa18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 SUPT3HO75486 399 aa18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 FXR2P51116 673 aaKnown RBP eCLIP18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 PRAMEP78395 509 aa18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 NSUN2Q08J23 767 aaKnown RBP eCLIP18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 RC3H1Q5TC82 1133 aaKnown RBP18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 CATSPER3Q86XQ3 398 aa18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 SENP7Q9BQF6 1050 aa18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 JMJD4Q9H9V9 463 aa18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 SLC12A6Q9UHW9 1150 aa18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 ZHX2Q9Y6X8 837 aa18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 FOXN3O00409 490 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC10-203ENST00000422875 ENO3P13929 434 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms