RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 CNTNAP2Q9UHC6 1331 aa14.78□□□□□ -0.04
CDCA3-202ENST00000422785 GAS2O43903 313 aaKnown RBP14.78□□□□□ -0.04
CDCA3-202ENST00000422785 UNGP13051 313 aaPredicted RBP14.78□□□□□ -0.04
CDCA3-202ENST00000422785 CAPN2P17655 700 aa14.78□□□□□ -0.04
CDCA3-202ENST00000422785 TTLL12Q14166 644 aaPredicted RBP14.78□□□□□ -0.04
CDCA3-202ENST00000422785 Q3C1V9 767 aa14.78□□□□□ -0.04
CDCA3-202ENST00000422785 EXOC8Q8IYI6 725 aa14.78□□□□□ -0.04
CDCA3-202ENST00000422785 GLG1Q92896 1179 aa14.78□□□□□ -0.04
CDCA3-202ENST00000422785 UTP11Q9Y3A2 253 aaKnown RBP14.78□□□□□ -0.04
CDCA3-202ENST00000422785 CLDN3O15551 220 aa14.77□□□□□ -0.04
CDCA3-202ENST00000422785 CTNNA1P35221 906 aaKnown RBP14.77□□□□□ -0.04
CDCA3-202ENST00000422785 MARCKSL1P49006 195 aa14.77□□□□□ -0.04
CDCA3-202ENST00000422785 KCTD2Q14681 263 aa14.77□□□□□ -0.04
CDCA3-202ENST00000422785 NAA35Q5VZE5 725 aa14.77□□□□□ -0.04
CDCA3-202ENST00000422785 FASTKD5Q7L8L6 764 aaKnown RBP14.77□□□□□ -0.04
CDCA3-202ENST00000422785 PLPPR4Q7Z2D5 763 aa14.77□□□□□ -0.04
CDCA3-202ENST00000422785 DDX42Q86XP3 938 aaKnown RBP eCLIP14.77□□□□□ -0.04
CDCA3-202ENST00000422785 FAM76AQ8TAV0 307 aa14.77□□□□□ -0.04
CDCA3-202ENST00000422785 TCP11Q8WWU5 503 aa14.77□□□□□ -0.04
CDCA3-202ENST00000422785 PIK3R5Q8WYR1 880 aa14.77□□□□□ -0.04
CDCA3-202ENST00000422785 MMP19Q99542 508 aa14.77□□□□□ -0.04
CDCA3-202ENST00000422785 CNOT8Q9UFF9 292 aaKnown RBP14.77□□□□□ -0.04
CDCA3-202ENST00000422785 ACO1P21399 889 aaKnown RBP14.77□□□□□ -0.05
CDCA3-202ENST00000422785 OSBPP22059 807 aa14.77□□□□□ -0.05
CDCA3-202ENST00000422785 CTNNA2P26232 953 aa14.77□□□□□ -0.05
CDCA3-202ENST00000422785 CUL2Q13617 745 aa14.77□□□□□ -0.05
CDCA3-202ENST00000422785 HSDL1Q3SXM5 330 aa14.77□□□□□ -0.05
CDCA3-202ENST00000422785 CDCA2Q69YH5 1023 aaPredicted RBP14.77□□□□□ -0.05
CDCA3-202ENST00000422785 USP50Q70EL3 339 aaPredicted RBP14.77□□□□□ -0.05
CDCA3-202ENST00000422785 CD302Q8IX05 232 aa14.77□□□□□ -0.05
CDCA3-202ENST00000422785 ATP8B4Q8TF62 1192 aa14.77□□□□□ -0.05
CDCA3-202ENST00000422785 ZC3H15Q8WU90 426 aaKnown RBP14.77□□□□□ -0.05
CDCA3-202ENST00000422785 CELF4Q9BZC1 486 aaKnown RBP14.77□□□□□ -0.05
CDCA3-202ENST00000422785 CCDC113Q9H0I3 377 aa14.77□□□□□ -0.05
CDCA3-202ENST00000422785 FAM114A2Q9NRY5 505 aa14.77□□□□□ -0.05
CDCA3-202ENST00000422785 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.77□□□□□ -0.05
CDCA3-202ENST00000422785 PCDHA3Q9Y5H8 950 aa14.77□□□□□ -0.05
CDCA3-202ENST00000422785 NOP56O00567 594 aaKnown RBP14.76□□□□□ -0.05
CDCA3-202ENST00000422785 DAPK3O43293 454 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 MSCO60682 206 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 MYBL1P10243 752 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 MXD4Q14582 209 aaPredicted RBP14.76□□□□□ -0.05
CDCA3-202ENST00000422785 SPOPLQ6IQ16 392 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 OPTNQ96CV9 577 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 BTBD6Q96KE9 485 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 MRPL4Q9BYD3 311 aaKnown RBP14.76□□□□□ -0.05
CDCA3-202ENST00000422785 RAB17Q9H0T7 212 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 MROH8Q9H579 483 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 APOBEC3GQ9HC16 384 aaKnown RBP14.76□□□□□ -0.05
CDCA3-202ENST00000422785 ERVK-5Q9HDB9 667 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 AVENQ9NQS1 362 aaPredicted RBP14.76□□□□□ -0.05
CDCA3-202ENST00000422785 IGKV6-21A0A0C4DH24 114 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 ZBTB42B2RXF5 422 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 SPOPO43791 374 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 TOM1L1O75674 476 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 CALCAP01258 141 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 ACTN2P35609 894 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 AP3M2P53677 418 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 DR1Q01658 176 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 LAMTOR4Q0VGL1 99 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 GRM1Q13255 1194 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 MKRN4PQ13434 485 aaPredicted RBP14.76□□□□□ -0.05
CDCA3-202ENST00000422785 DHX34Q14147 1143 aaKnown RBP14.76□□□□□ -0.05
CDCA3-202ENST00000422785 SEL1L2Q5TEA6 688 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 ADAT2Q7Z6V5 191 aaKnown RBP14.76□□□□□ -0.05
CDCA3-202ENST00000422785 MCOLN2Q8IZK6 566 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 LRRC45Q96CN5 670 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 TRIM11Q96F44 468 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 NEUROG2Q9H2A3 272 aa14.76□□□□□ -0.05
CDCA3-202ENST00000422785 FAM187AA6NFU0 413 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 FAM189A1O60320 539 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 CYP1A1P04798 512 aaPredicted RBP14.75□□□□□ -0.05
CDCA3-202ENST00000422785 CLTAP09496 248 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 TBXAS1P24557 533 aaPredicted RBP14.75□□□□□ -0.05
CDCA3-202ENST00000422785 C9orf131Q5VYM1 1079 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 GPAT2Q6NUI2 795 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 AADACL2Q6P093 401 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 CCDC62Q6P9F0 684 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 BRSK2Q8IWQ3 736 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 OR5B17Q8NGF7 314 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 CNTN6Q9UQ52 1028 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 LOC102724159A0A0B4J2E5 919 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 TTLL13PA6NNM8 815 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 PYGMP11217 842 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 MARK3P27448 753 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 PLCB4Q15147 1175 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 PWP2Q15269 919 aaKnown RBP14.75□□□□□ -0.05
CDCA3-202ENST00000422785 TRIM50Q86XT4 487 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 UPF1Q92900 1129 aaKnown RBP eCLIP14.75□□□□□ -0.05
CDCA3-202ENST00000422785 ARL8AQ96BM9 186 aa14.75□□□□□ -0.05
CDCA3-202ENST00000422785 ACO2Q99798 780 aaKnown RBP14.75□□□□□ -0.05
CDCA3-202ENST00000422785 PHF2O75151 1096 aa14.74□□□□□ -0.05
CDCA3-202ENST00000422785 HARSP12081 509 aaKnown RBP14.74□□□□□ -0.05
CDCA3-202ENST00000422785 CHRNA3P32297 505 aa14.74□□□□□ -0.05
CDCA3-202ENST00000422785 SLC26A2P50443 739 aa14.74□□□□□ -0.05
CDCA3-202ENST00000422785 NOP14P78316 857 aaKnown RBP14.74□□□□□ -0.05
CDCA3-202ENST00000422785 CENPCQ03188 943 aa14.74□□□□□ -0.05
CDCA3-202ENST00000422785 TTMPQ5BVD1 217 aa14.74□□□□□ -0.05
CDCA3-202ENST00000422785 TRIM72Q6ZMU5 477 aa14.74□□□□□ -0.05
CDCA3-202ENST00000422785 ZBTB8OSQ8IWT0 167 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms