RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 P2RX5Q93086 422 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 C18orf25Q96B23 403 aaPredicted RBP10.08□□□□□ -0.8
PDGFC-202ENST00000422544 EEF2KMTQ96G04 330 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 DHTKD1Q96HY7 919 aaPredicted RBP10.08□□□□□ -0.8
PDGFC-202ENST00000422544 AAASQ9NRG9 546 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 DMAC2Q9NW81 257 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 RBAKQ9NYW8 714 aaPredicted RBP10.08□□□□□ -0.8
PDGFC-202ENST00000422544 CNTN3Q9P232 1028 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 CACNG4Q9UBN1 327 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 DNAJB4Q9UDY4 337 aa10.08□□□□□ -0.8
PDGFC-202ENST00000422544 COL4A6Q14031 1691 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 TRIM49BA6NDI0 452 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 EPOPA6NHQ4 379 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 CASTOR2A6NHX0 329 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 NT5C1B-RDH14C9J2C7 533 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 RFXAPO00287 272 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 PSMA7O14818 248 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 ADRB2P07550 413 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 LAG3P18627 525 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 NR2F2P24468 414 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 CCNE1P24864 410 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 PPP1R2P41236 205 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 OR1G1P47890 313 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 SLC11A1P49279 550 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 ALDH7A1P49419 539 aaKnown RBP10.07□□□□□ -0.8
PDGFC-202ENST00000422544 CASP4P49662 377 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 STX17P56962 302 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 NLRP12P59046 1061 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 POU5F1Q01860 360 aaKnown RBP10.07□□□□□ -0.8
PDGFC-202ENST00000422544 PPP2R3AQ06190 1150 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 DSC1Q08554 894 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 ADAM9Q13443 819 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 MYBPC2Q14324 1141 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 NAB2Q15742 525 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 SNRNP35Q16560 246 aaKnown RBP10.07□□□□□ -0.8
PDGFC-202ENST00000422544 KLHL40Q2TBA0 621 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 ZCWPW2Q504Y3 356 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 CEP135Q66GS9 1140 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 JADE1Q6IE81 842 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 KCNT2Q6UVM3 1135 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 RBM43Q6ZSC3 357 aaKnown RBP10.07□□□□□ -0.8
PDGFC-202ENST00000422544 SLC9A9Q8IVB4 645 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 BRSK2Q8IWQ3 736 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 CD302Q8IX05 232 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 COLGALT2Q8IYK4 626 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 TMEM130Q8N3G9 435 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 MLKLQ8NB16 471 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 KLHL23Q8NBE8 558 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 COLGALT1Q8NBJ5 622 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 TMEM174Q8WUU8 243 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 NELFBQ8WX92 580 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 KIF12Q96FN5 646 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 FBXL18Q96ME1 805 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 ZNF558Q96NG5 402 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 SAMD11Q96NU1 681 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 PPP1R10Q96QC0 940 aaKnown RBP10.07□□□□□ -0.8
PDGFC-202ENST00000422544 TSG101Q99816 390 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 TMEM175Q9BSA9 504 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 KIAA1586Q9HCI6 787 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 PDE11AQ9HCR9 933 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 CTNND2Q9UQB3 1225 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 FAN1Q9Y2M0 1017 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 RWDD3Q9Y3V2 267 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 PCDHB12Q9Y5F1 795 aa10.07□□□□□ -0.8
PDGFC-202ENST00000422544 TMEM265A0A087WTH1 108 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 NRP1O14786 923 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 AKAP3O75969 853 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 IL18RAPO95256 599 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 RB1P06400 928 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 NFICP08651 508 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 RPL13P26373 211 aaKnown RBP10.06□□□□□ -0.8
PDGFC-202ENST00000422544 GUCY2FP51841 1108 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 SOX4Q06945 474 aaPredicted RBP10.06□□□□□ -0.8
PDGFC-202ENST00000422544 CYP24A1Q07973 514 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 PAK1Q13153 545 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 TUSC3Q13454 348 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 ZBTB6Q15916 424 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 NFIL3Q16649 462 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 SKOR2Q2VWA4 1001 aaPredicted RBP10.06□□□□□ -0.8
PDGFC-202ENST00000422544 EDRF1Q3B7T1 1238 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 DPCR1Q3MIW9 517 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 POTEHQ6S545 545 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 SASS6Q6UVJ0 657 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 TMEM173Q86WV6 379 aaPredicted RBP10.06□□□□□ -0.8
PDGFC-202ENST00000422544 FBXO22Q8NEZ5 403 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 SYAP1Q96A49 352 aaPredicted RBP10.06□□□□□ -0.8
PDGFC-202ENST00000422544 CCDC127Q96BQ5 260 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 FAM84AQ96KN4 292 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 NECAB3Q96P71 396 aaPredicted RBP10.06□□□□□ -0.8
PDGFC-202ENST00000422544 DUSP9Q99956 384 aaKnown RBP10.06□□□□□ -0.8
PDGFC-202ENST00000422544 PAAF1Q9BRP4 392 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 PLVAPQ9BX97 442 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 PRDM12Q9H4Q4 367 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 ASB7Q9H672 318 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 GOLGA2P5Q9HBQ8 144 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 SLC38A7Q9NVC3 462 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 SPG21Q9NZD8 308 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 TUBGCP4Q9UGJ1 667 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 FRMD4BQ9Y2L6 1034 aa10.06□□□□□ -0.8
PDGFC-202ENST00000422544 PRG3Q9Y2Y8 225 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms