RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 AXDND1Q5T1B0 1012 aaPredicted RBP20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 DCLRE1AQ6PJP8 1040 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 RSPO2Q6UXX9 243 aaPredicted RBP20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 DAW1Q8N136 415 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 ADSSL1Q8N142 457 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 DDX23Q9BUQ8 820 aaKnown RBP20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 CDT1Q9H211 546 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 SEMA4AQ9H3S1 761 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 PTPRHQ9HD43 1115 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 ARHGAP28Q9P2N2 729 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 B3GAT3O94766 335 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 TKTP29401 623 aaKnown RBP20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 OR1D2P34982 312 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 FOXK2Q01167 660 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 SOX4Q06945 474 aaPredicted RBP20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 NBR1Q14596 966 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 ALKAL1Q6UXT8 129 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 APBB1IPQ7Z5R6 666 aaPredicted RBP20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 NPAS3Q8IXF0 933 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 CEP120Q8N960 986 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 ITFG1Q8TB96 612 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 GOLGA2P5Q9HBQ8 144 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 DDX19AQ9NUU7 478 aaKnown RBP20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 LRWD1Q9UFC0 647 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 KCNH3Q9ULD8 1083 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 KIAA1024Q9UPX6 916 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 SIT1Q9Y3P8 196 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 STK24Q9Y6E0 443 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 CDY1Q9Y6F8 540 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 TSC2P49815 1807 aa20.47■□□□□ 0.87
AC004540.1-203ENST00000421862 SMIM28A0A1B0GU29 152 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 STK25O00506 426 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 ABLIM1O14639 778 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 DCNP07585 359 aaKnown RBP20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 GLULP15104 373 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 PROZP22891 400 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 U2AF2P26368 475 aaKnown RBP eCLIP20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 NPTX2P47972 431 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 GPC5P78333 572 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 MAPK7Q13164 816 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 PDIA5Q14554 519 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 SLC8B1Q6J4K2 584 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 ANKS3Q6ZW76 656 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 TAS1R3Q7RTX0 852 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 ST13P5Q8NFI4 369 aaPredicted RBP20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 SNX29Q8TEQ0 813 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 ACO2Q99798 780 aaKnown RBP20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 TMEM134Q9H6X4 195 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 POLD4Q9HCU8 107 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 AVENQ9NQS1 362 aaPredicted RBP20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 TOPORSQ9NS56 1045 aaPredicted RBP20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 HCFC1R1Q9NWW0 138 aa20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 DNMT3BQ9UBC3 853 aaKnown RBP20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 NOL7Q9UMY1 257 aaKnown RBP20.46■□□□□ 0.87
AC004540.1-203ENST00000421862 DNAH14Q0VDD8 3507 aa20.45■□□□□ 0.86
AC004540.1-203ENST00000421862 TICRRQ7Z2Z1 1910 aa20.45■□□□□ 0.86
AC004540.1-203ENST00000421862 K7ERI5 159 aa20.45■□□□□ 0.86
AC004540.1-203ENST00000421862 TOB1P50616 345 aaPredicted RBP20.45■□□□□ 0.86
AC004540.1-203ENST00000421862 ZNF568Q3ZCX4 644 aa20.45■□□□□ 0.86
AC004540.1-203ENST00000421862 PABPC1LQ4VXU2 614 aaKnown RBP20.45■□□□□ 0.86
AC004540.1-203ENST00000421862 FOXQ1Q9C009 403 aa20.45■□□□□ 0.86
AC004540.1-203ENST00000421862 ARHGEF37A1IGU5 675 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 TRAPPC3O43617 180 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 BRCC3P46736 316 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 PEX3P56589 373 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 ROR1Q01973 937 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 PRKCQQ04759 706 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 SPECC1Q5M775 1068 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 ERICH6BQ5W0A0 696 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 C1orf210Q8IVY1 113 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 SHDQ96IW2 340 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 CCDC94Q9BW85 323 aaPredicted RBP20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 MRPL4Q9BYD3 311 aaKnown RBP20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 RAB34Q9BZG1 259 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 SH2B1Q9NRF2 756 aaPredicted RBP20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 CNTN3Q9P232 1028 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 POLIQ9UNA4 740 aa20.44■□□□□ 0.86
AC004540.1-203ENST00000421862 ANK1P16157 1881 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 E9PMD0 336 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 I3L4J1 428 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 LAD1O00515 517 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 TBC1D4O60343 1298 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 HIP1RO75146 1068 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 LMNAP02545 664 aaKnown RBP20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 KCNE1P15382 129 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 PRPHP41219 470 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 YARSP54577 528 aaKnown RBP20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 PTGDRQ13258 359 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 DMP1Q13316 513 aaPredicted RBP20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 MLF2Q15773 248 aaPredicted RBP20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 SLC5A9Q2M3M2 681 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 ZSCAN31Q96LW9 406 aaPredicted RBP20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 DRC1Q96MC2 740 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 ZMAT2Q96NC0 199 aaKnown RBP20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 KIF2CQ99661 725 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 RUSC1Q9BVN2 902 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 C17orf75Q9HAS0 396 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 SLC38A7Q9NVC3 462 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 PCDHB6Q9Y5E3 794 aa20.43■□□□□ 0.86
AC004540.1-203ENST00000421862 NUP210Q8TEM1 1887 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms