RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 KCNT1Q5JUK3 1230 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 SLC13A5Q86YT5 568 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-213ENST00000421756 FAM71AQ8IYT1 594 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 SLC7A3Q8WY07 619 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 COPS5Q92905 334 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 PSMD1Q99460 953 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 INO80BQ9C086 356 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-213ENST00000421756 ATP6V0A4Q9HBG4 840 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 FAM114A2Q9NRY5 505 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 RPL7AP62424 266 aaKnown RBP14.26□□□□□ -0.13
MCF2L-213ENST00000421756 FOXR2Q6PJQ5 311 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 RUFY4Q6ZNE9 571 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 RAPGEF5Q92565 580 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 SLITRK6Q9H5Y7 841 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 TMEM8AQ9HCN3 771 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 TULP2O00295 520 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 KIAA0391O15091 583 aaKnown RBP14.26□□□□□ -0.13
MCF2L-213ENST00000421756 CST3P01034 146 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-213ENST00000421756 CHN1P15882 459 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 BRD2P25440 801 aaKnown RBP14.26□□□□□ -0.13
MCF2L-213ENST00000421756 BAG6P46379 1132 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 PPP2R2AP63151 447 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 TDRD10Q5VZ19 366 aaKnown RBP14.26□□□□□ -0.13
MCF2L-213ENST00000421756 CCDC33Q8N5R6 958 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 NAP1L3Q99457 506 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-213ENST00000421756 PRMT1Q99873 361 aaKnown RBP14.26□□□□□ -0.13
MCF2L-213ENST00000421756 ZNF302Q9NR11 478 aa14.26□□□□□ -0.13
MCF2L-213ENST00000421756 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.26□□□□□ -0.13
MCF2L-213ENST00000421756 HMGB1P1B2RPK0 211 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-213ENST00000421756 GNA15P30679 374 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 RAP1GAPP47736 663 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 CDR2Q01850 454 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 DCUN1D2Q6PH85 259 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 MTMR12Q9C0I1 747 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 KCND2Q9NZV8 630 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 MTRF1LQ9UGC7 380 aaKnown RBP14.25□□□□□ -0.13
MCF2L-213ENST00000421756 LAMA3Q16787 3333 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 ECEL1O95672 775 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 EDN1P05305 212 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 CORO7P57737 925 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 TAS1R3Q7RTX0 852 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 TADA2BQ86TJ2 420 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 RHPN2Q8IUC4 686 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 CALR3Q96L12 384 aaKnown RBP14.25□□□□□ -0.13
MCF2L-213ENST00000421756 SCLT1Q96NL6 688 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 ELAC2Q9BQ52 826 aaKnown RBP14.25□□□□□ -0.13
MCF2L-213ENST00000421756 EPN3Q9H201 632 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 CYP39A1Q9NYL5 469 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 ZNF541Q9H0D2 1346 aa14.25□□□□□ -0.13
MCF2L-213ENST00000421756 DSG3P32926 999 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 COILP38432 576 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-213ENST00000421756 MNAT1P51948 309 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 SPRED3Q2MJR0 410 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 SHC3Q92529 594 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 ZWILCHQ9H900 591 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 A0A0A6YYK5 440 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-213ENST00000421756 TLR3O15455 904 aaKnown RBP14.24□□□□□ -0.13
MCF2L-213ENST00000421756 PHF2O75151 1096 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 MAPTP10636 758 aaKnown RBP14.24□□□□□ -0.13
MCF2L-213ENST00000421756 KCNA2P16389 499 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 NRLP54845 237 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 TAS2R40P59535 323 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 FAM133BQ5BKY9 247 aaKnown RBP14.24□□□□□ -0.13
MCF2L-213ENST00000421756 KDM7AQ6ZMT4 941 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 MAP4K3Q8IVH8 894 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 RASGEF1CQ8N431 466 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 RNF149Q8NC42 400 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 KAT2BQ92831 832 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 TEX13BQ9BXU2 312 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 HAPLN2Q9GZV7 340 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 APOBEC3GQ9HC16 384 aaKnown RBP14.24□□□□□ -0.13
MCF2L-213ENST00000421756 PCSK1NQ9UHG2 260 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 ZNF214Q9UL59 606 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-213ENST00000421756 POC1B-GALNT4F8VUJ3 575 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 H0YGN5 161 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 NOP56O00567 594 aaKnown RBP14.24□□□□□ -0.13
MCF2L-213ENST00000421756 BANF1O75531 89 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 CDH8P55286 799 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 ADCY2Q08462 1091 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 GNPTABQ3T906 1256 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 SCYL3Q8IZE3 742 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 SYT11Q9BT88 431 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 ACAD9Q9H845 621 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 ELP3Q9H9T3 547 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 TJP2Q9UDY2 1190 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 ZNF148Q9UQR1 794 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 NUB1Q9Y5A7 615 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 NFS1Q9Y697 457 aa14.24□□□□□ -0.13
MCF2L-213ENST00000421756 NRXN2Q9P2S2 1712 aa14.23□□□□□ -0.13
MCF2L-213ENST00000421756 GGPS1O95749 300 aa14.23□□□□□ -0.13
MCF2L-213ENST00000421756 DUPD1Q68J44 220 aa14.23□□□□□ -0.13
MCF2L-213ENST00000421756 ZNF365Q70YC5 407 aa14.23□□□□□ -0.13
MCF2L-213ENST00000421756 C1orf131Q8NDD1 294 aaKnown RBP14.23□□□□□ -0.13
MCF2L-213ENST00000421756 NLGN2Q8NFZ4 835 aa14.23□□□□□ -0.13
MCF2L-213ENST00000421756 IWS1Q96ST2 819 aa14.23□□□□□ -0.13
MCF2L-213ENST00000421756 STRA6Q9BX79 667 aa14.23□□□□□ -0.13
MCF2L-213ENST00000421756 SYNGAP1Q96PV0 1343 aa14.23□□□□□ -0.13
MCF2L-213ENST00000421756 GMNCA6NCL1 334 aa14.23□□□□□ -0.13
MCF2L-213ENST00000421756 ADM5C9JUS6 153 aa14.23□□□□□ -0.13
MCF2L-213ENST00000421756 TBC1D12O60347 775 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms