RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 TRAPPC12Q8WVT3 735 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 USP6NLQ92738 828 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 TAF4BQ92750 862 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 FAXDC2Q96IV6 333 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 RHOXF2Q9BQY4 288 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 THAP2Q9H0W7 228 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 SUGCTQ9HAC7 445 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 IFT122Q9HBG6 1241 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 APOBEC3GQ9HC16 384 aaKnown RBP9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 AVENQ9NQS1 362 aaPredicted RBP9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 PRMT7Q9NVM4 692 aaPredicted RBP9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 SLC5A4Q9NY91 659 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 L1RE1Q9UN81 338 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 PCDHB2Q9Y5E7 798 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 SCN10AQ9Y5Y9 1956 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 DDX3YO15523 660 aaKnown RBP9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 SASH3O75995 380 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 CLSTN1O94985 981 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 IL18RAPO95256 599 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 CYP1A1P04798 512 aaPredicted RBP9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 MMEP08473 750 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 MCF2P10911 925 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 UNGP13051 313 aaPredicted RBP9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 SMPD1P17405 629 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 CXCR5P32302 372 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 TNFSF9P41273 254 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 MAP2K5Q13163 448 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 ACVR2BQ13705 512 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 NCOA4Q13772 614 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 KYAT1Q16773 422 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 MAP9Q49MG5 647 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 GJC2Q5T442 439 aaPredicted RBP9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 LMBRD2Q68DH5 695 aaPredicted RBP9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 CCDC70Q6NSX1 233 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 PPP1R2P3Q6NXS1 205 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 TRIM72Q6ZMU5 477 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 DPP9Q86TI2 863 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 RHPN2Q8IUC4 686 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 KRT222Q8N1A0 295 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 METTL13Q8N6R0 699 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 OR5B17Q8NGF7 314 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 FAM84AQ96KN4 292 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 RPS6KC1Q96S38 1066 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 PI4K2AQ9BTU6 479 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 CDT1Q9H211 546 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 CARD9Q9H257 536 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 MINDY3Q9H8M7 445 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 OSGEPQ9NPF4 335 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 RBM12Q9NTZ6 932 aaKnown RBP9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 EHD2Q9NZN4 543 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 UVRAGQ9P2Y5 699 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 AMFRQ9UKV5 643 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 COG5Q9UP83 839 aa9.72□□□□□ -0.85
LINCMD1-201ENST00000418518 RRN3P2A6NIE6 340 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 A6NJR5 290 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 TMCO5BA8MYB1 307 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 MIF4GDA9UHW6 222 aaKnown RBP9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 H3BRB1 525 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 PGRMC1O00264 195 aaKnown RBP9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 IGF2BP3O00425 579 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 KCNK3O14649 394 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 SRGAP2CP0DJJ0 459 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 MYBL1P10243 752 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 ABCB4P21439 1286 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 USP8P40818 1118 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 MATR3P43243 847 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 PLA2G4AP47712 749 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 HUNKP57058 714 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 TNFAIP2Q03169 654 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 CENPCQ03188 943 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 MKRN3Q13064 507 aaKnown RBP9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 BIRC3Q13489 604 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 DGKDQ16760 1214 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 ZNF568Q3ZCX4 644 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 TAF3Q5VWG9 929 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 EEF1DP3Q658K8 133 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 OLFML2BQ68BL8 750 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 ACAD10Q6JQN1 1059 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 CHADLQ6NUI6 762 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 MTHFD1LQ6UB35 978 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 DAAM2Q86T65 1068 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 ZNF410Q86VK4 478 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 OR6J1Q8NGC5 347 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 CD101Q93033 1021 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 MS4A14Q96JA4 679 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 PSMB7Q99436 277 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 ARID3AQ99856 593 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 SELENOOQ9BVL4 669 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 GOLPH3Q9H4A6 298 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 TUT1Q9H6E5 874 aaKnown RBP9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 SEPT11Q9NVA2 429 aaKnown RBP9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 SMARCAL1Q9NZC9 954 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 STIM2Q9P246 746 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 PACSIN2Q9UNF0 486 aaPredicted RBP9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 GNEQ9Y223 722 aaKnown RBP9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 NUB1Q9Y5A7 615 aa9.71□□□□□ -0.86
LINCMD1-201ENST00000418518 SCN1AP35498 2009 aa9.7□□□□□ -0.86
LINCMD1-201ENST00000418518 CCDC188H7C350 402 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms