RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 TMEM270Q6UE05 265 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 YTHDF3Q7Z739 585 aaKnown RBP12.69□□□□□ -0.38
LIMK1-202ENST00000418310 NLRX1Q86UT6 975 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 PARP9Q8IXQ6 854 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 CYP4X1Q8N118 509 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 CCT6BQ92526 530 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 KIFAP3Q92845 792 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 CD101Q93033 1021 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 RPS6KC1Q96S38 1066 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 AAASQ9NRG9 546 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 PPP1R1BQ9UD71 204 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-202ENST00000418310 COL11A2P13942 1736 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-202ENST00000418310 CCT8L1PA6NM43 557 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 ASNSP08243 561 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 RARGP13631 454 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 RFX1P22670 979 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 PIK3CAP42336 1068 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 NSFP46459 744 aaKnown RBP12.69□□□□□ -0.38
LIMK1-202ENST00000418310 HSD17B4P51659 736 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 SNCBQ16143 134 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 ACAD10Q6JQN1 1059 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 C10orf88Q9H8K7 445 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 TMEM8AQ9HCN3 771 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 ANAPC5Q9UJX4 755 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 LOC102724159A0A0B4J2E5 919 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 WDR64B1ANS9 1081 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 GOLGA8SH3BPF8 625 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 GOLGA8MH3BSY2 632 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 RASSF9O75901 435 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 ETS1P14921 441 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 TCF4P15884 667 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 TAS2R40P59535 323 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 SLMAPQ14BN4 828 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 PWP2Q15269 919 aaKnown RBP12.69□□□□□ -0.38
LIMK1-202ENST00000418310 TMED2Q15363 201 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 CNGA2Q16280 664 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 ZNF365Q70YC5 407 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 FMNL3Q8IVF7 1028 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 ART4Q93070 314 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 PGM2Q96G03 612 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 PDCD2LQ9BRP1 358 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 PARP2Q9UGN5 583 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 UMODL1Q5DID0 1318 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 LRRIQ4A6NIV6 560 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 POC1B-GALNT4F8VUJ3 575 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 UBOX5O94941 541 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 AGTP01019 485 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 CETPP11597 493 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 BRAFP15056 766 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 LIG4P49917 911 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 TRIM33Q9UPN9 1127 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 EXOC7Q9UPT5 735 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 PCDHB4Q9Y5E5 795 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 UBIAD1Q9Y5Z9 338 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 MROH7Q68CQ1 1323 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 IFNB1P01574 187 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 CYP1A2P05177 515 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 PAEPP09466 180 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 GZMAP12544 262 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 HSPA6P17066 643 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 PTGER2P43116 358 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 NLRP11P59045 1033 aaKnown RBP12.68□□□□□ -0.38
LIMK1-202ENST00000418310 CYP24A1Q07973 514 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 ANKS1BQ7Z6G8 1248 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 CCDC63Q8NA47 563 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 GLIS1Q8NBF1 620 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 PSPC1Q8WXF1 523 aaKnown RBP12.68□□□□□ -0.38
LIMK1-202ENST00000418310 ZNF516Q92618 1163 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 PAGR1Q9BTK6 254 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 RPAP3Q9H6T3 665 aaPredicted RBP12.68□□□□□ -0.38
LIMK1-202ENST00000418310 ACTR5Q9H9F9 607 aaPredicted RBP12.68□□□□□ -0.38
LIMK1-202ENST00000418310 AGAP1Q9UPQ3 857 aa12.68□□□□□ -0.38
LIMK1-202ENST00000418310 WNT10BO00744 389 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 MAP2K2P36507 400 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 DYNLT1P63172 113 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 PLCB3Q01970 1234 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 MPP2Q14168 576 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 CLEC16AQ2KHT3 1053 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 TAOK1Q7L7X3 1001 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 DDX1Q92499 740 aaKnown RBP12.67□□□□□ -0.38
LIMK1-202ENST00000418310 RNF146Q9NTX7 359 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 PNMA3Q9UL41 463 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 PTPRJQ12913 1337 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 C5orf60A6NFR6 353 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 BANF1O75531 89 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 NPM3O75607 178 aaKnown RBP12.67□□□□□ -0.38
LIMK1-202ENST00000418310 STX2P32856 288 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 KCNJ2P63252 427 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 SYCP2LQ5T4T6 812 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 PCNX4Q63HM2 1172 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 FAM228AQ86W67 206 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 MCOLN2Q8IZK6 566 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 PRCCQ92733 491 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-202ENST00000418310 SGSM3Q96HU1 749 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 POLR3FQ9H1D9 316 aaPredicted RBP12.67□□□□□ -0.38
LIMK1-202ENST00000418310 KIF9Q9HAQ2 790 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 QSER1Q2KHR3 1735 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 HLA-DRAP01903 254 aa12.67□□□□□ -0.38
LIMK1-202ENST00000418310 DSG3P32926 999 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms