RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 DAW1Q8N136 415 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 CEP120Q8N960 986 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 FGF13Q92913 245 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 KIF2CQ99661 725 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 ACO2Q99798 780 aaKnown RBP15.84■□□□□ 0.13
PAF1-202ENST00000416728 RUSC1Q9BVN2 902 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 TMEM134Q9H6X4 195 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 KMT5AQ9NQR1 393 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 ARHGAP28Q9P2N2 729 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 RBM19Q9Y4C8 960 aaKnown RBP15.84■□□□□ 0.13
PAF1-202ENST00000416728 CDY1Q9Y6F8 540 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 USP34Q70CQ2 3546 aa15.84■□□□□ 0.13
PAF1-202ENST00000416728 I3L4J1 428 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 TKTP29401 623 aaKnown RBP15.83■□□□□ 0.12
PAF1-202ENST00000416728 PRPHP41219 470 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 PHLDB3Q6NSJ2 640 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 PARM1Q6UWI2 310 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 DTHD1Q6ZMT9 781 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 MTSS1LQ765P7 747 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 C3orf58Q8NDZ4 430 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 FGF14Q92915 247 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 DDX27Q96GQ7 796 aaKnown RBP15.83■□□□□ 0.12
PAF1-202ENST00000416728 TCHPQ9BT92 498 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 TARS2Q9BW92 718 aaKnown RBP15.83■□□□□ 0.12
PAF1-202ENST00000416728 C17orf75Q9HAS0 396 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 PTPRHQ9HD43 1115 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 SLC38A7Q9NVC3 462 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 KIF3AQ9Y496 699 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 BACE2Q9Y5Z0 518 aa15.83■□□□□ 0.12
PAF1-202ENST00000416728 MCF2P10911 925 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 CDC25AP30304 524 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 BRCC3P46736 316 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 SOX4Q06945 474 aaPredicted RBP15.82■□□□□ 0.12
PAF1-202ENST00000416728 PABPC1LQ4VXU2 614 aaKnown RBP15.82■□□□□ 0.12
PAF1-202ENST00000416728 XKR4Q5GH76 650 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 RINT1Q6NUQ1 792 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 CD300LGQ6UXG3 332 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 RSPO2Q6UXX9 243 aaPredicted RBP15.82■□□□□ 0.12
PAF1-202ENST00000416728 RTL10Q7L3V2 364 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 TAS1R3Q7RTX0 852 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 ITFG1Q8TB96 612 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 SNX27Q96L92 541 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 ACAP3Q96P50 834 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 RPP25Q9BUL9 199 aaKnown RBP15.82■□□□□ 0.12
PAF1-202ENST00000416728 HCFC1R1Q9NWW0 138 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 SIT1Q9Y3P8 196 aa15.82■□□□□ 0.12
PAF1-202ENST00000416728 DOCK8Q8NF50 2099 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 PODXLO00592 558 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 DCNP07585 359 aaKnown RBP15.81■□□□□ 0.12
PAF1-202ENST00000416728 GPC5P78333 572 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 MAPK7Q13164 816 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 ZRSR1Q15695 479 aaKnown RBP15.81■□□□□ 0.12
PAF1-202ENST00000416728 IL17AQ16552 155 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 SPECC1Q5M775 1068 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 MCTP1Q6DN14 999 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 MPZL3Q6UWV2 235 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 ALKAL1Q6UXT8 129 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 C1orf186Q6ZWK4 172 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 KCNK18Q7Z418 384 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 SHDQ96IW2 340 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 TIPINQ9BVW5 301 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.81■□□□□ 0.12
PAF1-202ENST00000416728 DNMT3BQ9UBC3 853 aaKnown RBP15.81■□□□□ 0.12
PAF1-202ENST00000416728 KCNH3Q9ULD8 1083 aa15.81■□□□□ 0.12
PAF1-202ENST00000416728 MTCL1Q9Y4B5 1905 aaKnown RBP15.8■□□□□ 0.12
PAF1-202ENST00000416728 SFI1A8K8P3 1242 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 SLC16A4O15374 487 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 HARSP12081 509 aaKnown RBP15.8■□□□□ 0.12
PAF1-202ENST00000416728 KCNE1P15382 129 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 PROZP22891 400 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 GUCY2CP25092 1073 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 ROR1Q01973 937 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 STRN3Q13033 797 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 RILPL1Q5EBL4 403 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 VARS2Q5ST30 1063 aaKnown RBP15.8■□□□□ 0.12
PAF1-202ENST00000416728 SLC8B1Q6J4K2 584 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 NPAS3Q8IXF0 933 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 ZNF461Q8TAF7 563 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 ZMAT2Q96NC0 199 aaKnown RBP15.8■□□□□ 0.12
PAF1-202ENST00000416728 MMTAG2Q9BU76 263 aaKnown RBP15.8■□□□□ 0.12
PAF1-202ENST00000416728 CNTN3Q9P232 1028 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 KCNG1Q9UIX4 513 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 MRPS23Q9Y3D9 190 aaKnown RBP15.8■□□□□ 0.12
PAF1-202ENST00000416728 NUB1Q9Y5A7 615 aa15.8■□□□□ 0.12
PAF1-202ENST00000416728 PTPRZ1P23471 2315 aaPredicted RBP15.8■□□□□ 0.12
PAF1-202ENST00000416728 ABLIM1O14639 778 aa15.79■□□□□ 0.12
PAF1-202ENST00000416728 SYN3O14994 580 aa15.79■□□□□ 0.12
PAF1-202ENST00000416728 ELF1P32519 619 aa15.79■□□□□ 0.12
PAF1-202ENST00000416728 RPL9P32969 192 aaKnown RBP15.79■□□□□ 0.12
PAF1-202ENST00000416728 STARD6P59095 220 aa15.79■□□□□ 0.12
PAF1-202ENST00000416728 RAD51AP2Q09MP3 1159 aa15.79■□□□□ 0.12
PAF1-202ENST00000416728 ADSSL1Q8N142 457 aa15.79■□□□□ 0.12
PAF1-202ENST00000416728 PJA1Q8NG27 643 aa15.79■□□□□ 0.12
PAF1-202ENST00000416728 SPIRE2Q8WWL2 714 aa15.79■□□□□ 0.12
PAF1-202ENST00000416728 ING5Q8WYH8 240 aa15.79■□□□□ 0.12
PAF1-202ENST00000416728 KXD1Q9BQD3 176 aa15.79■□□□□ 0.12
PAF1-202ENST00000416728 NTPCRQ9BSD7 190 aaKnown RBP15.79■□□□□ 0.12
PAF1-202ENST00000416728 FOXQ1Q9C009 403 aa15.79■□□□□ 0.12
PAF1-202ENST00000416728 DLGAP2Q9P1A6 1054 aa15.79■□□□□ 0.12
PAF1-202ENST00000416728 ANKFY1Q9P2R3 1169 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms