RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 SRGAP2CP0DJJ0 459 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 ERCC5P28715 1186 aaPredicted RBP8.4□□□□□ -1.06
RBM39-209ENST00000416529 KCNJ6P48051 423 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 LRRC63Q05C16 580 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 POU4F2Q12837 409 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 DSC3Q14574 896 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 KIZQ2M2Z5 673 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 EDRF1Q3B7T1 1238 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 CCDC183Q5T5S1 534 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 EPM2AIP1Q7L775 607 aaPredicted RBP8.4□□□□□ -1.06
RBM39-209ENST00000416529 DYMQ7RTS9 669 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 MRPL10Q7Z7H8 261 aaKnown RBP8.4□□□□□ -1.06
RBM39-209ENST00000416529 FAM228AQ86W67 206 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 NPAS4Q8IUM7 802 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 MYOCDQ8IZQ8 938 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 DHTKD1Q96HY7 919 aaPredicted RBP8.4□□□□□ -1.06
RBM39-209ENST00000416529 PLIN2Q99541 437 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 OSMRQ99650 979 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 MRPL9Q9BYD2 267 aaKnown RBP8.4□□□□□ -1.06
RBM39-209ENST00000416529 PANK2Q9BZ23 570 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 GBP3Q9H0R5 595 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 TIMMDC1Q9NPL8 285 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 TOPORSQ9NS56 1045 aaPredicted RBP8.4□□□□□ -1.06
RBM39-209ENST00000416529 TMEM161AQ9NX61 479 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 TRAF3IP3Q9Y228 551 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 NOC2LQ9Y3T9 749 aaKnown RBP8.4□□□□□ -1.06
RBM39-209ENST00000416529 PCDHA5Q9Y5H7 936 aa8.4□□□□□ -1.06
RBM39-209ENST00000416529 LTBP2Q14767 1821 aa8.4□□□□□ -1.07
RBM39-209ENST00000416529 TET1Q8NFU7 2136 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 MICAL3Q7RTP6 2002 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 SIP14410 1827 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 TMEM150BA6NC51 233 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 C9IYK1 514 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 CLDN3O15551 220 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 XPOTO43592 962 aaKnown RBP8.39□□□□□ -1.07
RBM39-209ENST00000416529 LIG1P18858 919 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 PROZP22891 400 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 CYP2C18P33260 490 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 AFMP43652 599 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 SCTRP47872 440 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 LIG4P49917 911 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 AP3M2P53677 418 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 MCL1Q07820 350 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 DRP2Q13474 957 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 CUL4BQ13620 913 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 DHX8Q14562 1220 aaKnown RBP8.39□□□□□ -1.07
RBM39-209ENST00000416529 MBTPS1Q14703 1052 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 KNOP1Q1ED39 458 aaKnown RBP8.39□□□□□ -1.07
RBM39-209ENST00000416529 MPZL3Q6UWV2 235 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 TRMT1LQ7Z2T5 733 aaKnown RBP8.39□□□□□ -1.07
RBM39-209ENST00000416529 SFR1Q86XK3 245 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 DBF4BQ8NFT6 615 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 BADQ92934 168 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 WNT8BQ93098 351 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 SAMD11Q96NU1 681 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 GAS2L1Q99501 681 aaPredicted RBP8.39□□□□□ -1.07
RBM39-209ENST00000416529 ACO2Q99798 780 aaKnown RBP8.39□□□□□ -1.07
RBM39-209ENST00000416529 MKNK1Q9BUB5 465 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 PPP1R12CQ9BZL4 782 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 NAT10Q9H0A0 1025 aaKnown RBP8.39□□□□□ -1.07
RBM39-209ENST00000416529 ASB7Q9H672 318 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 PTPRHQ9HD43 1115 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 TYW1Q9NV66 732 aaKnown RBP8.39□□□□□ -1.07
RBM39-209ENST00000416529 ANO10Q9NW15 660 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 CUEDC1Q9NWM3 386 aaPredicted RBP8.39□□□□□ -1.07
RBM39-209ENST00000416529 RAPGEFL1Q9UHV5 662 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 GIT1Q9Y2X7 761 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 DERAQ9Y315 318 aa8.39□□□□□ -1.07
RBM39-209ENST00000416529 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.38□□□□□ -1.07
RBM39-209ENST00000416529 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.38□□□□□ -1.07
RBM39-209ENST00000416529 ENPP3O14638 875 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 HNRNPDLO14979 420 aaKnown RBP8.38□□□□□ -1.07
RBM39-209ENST00000416529 SLC16A4O15374 487 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 CALUO43852 315 aaPredicted RBP8.38□□□□□ -1.07
RBM39-209ENST00000416529 TSPAN1O60635 241 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 GADD45BO75293 160 aaPredicted RBP8.38□□□□□ -1.07
RBM39-209ENST00000416529 GCNT3O95395 438 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 GNA14O95837 355 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 F11P03951 625 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 ADRB2P07550 413 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 CLTAP09496 248 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 GHRP10912 638 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 CSF2RAP15509 400 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 ARF4P18085 180 aaPredicted RBP8.38□□□□□ -1.07
RBM39-209ENST00000416529 HOXA11P31270 313 aaPredicted RBP8.38□□□□□ -1.07
RBM39-209ENST00000416529 YARSP54577 528 aaKnown RBP8.38□□□□□ -1.07
RBM39-209ENST00000416529 USP4Q13107 963 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 MORC3Q14149 939 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 GAS6Q14393 721 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 GPNMBQ14956 572 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 RAB30Q15771 203 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 TMEM240Q5SV17 173 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 ATF7IP2Q5U623 682 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 TWF2Q6IBS0 349 aaKnown RBP8.38□□□□□ -1.07
RBM39-209ENST00000416529 GPR65Q8IYL9 337 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 SYCP3Q8IZU3 236 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 LRRC15Q8TF66 581 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 NOC3LQ8WTT2 800 aaKnown RBP8.38□□□□□ -1.07
RBM39-209ENST00000416529 TMEM40Q8WWA1 233 aa8.38□□□□□ -1.07
RBM39-209ENST00000416529 BSNDQ8WZ55 320 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms