RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 ACTN1P12814 892 aa3.75□□□□□ -1.81
APP-207ENST00000415997 IFNGR1P15260 489 aa3.75□□□□□ -1.81
APP-207ENST00000415997 ATF7P17544 494 aaPredicted RBP3.75□□□□□ -1.81
APP-207ENST00000415997 L1CAMP32004 1257 aa3.75□□□□□ -1.81
APP-207ENST00000415997 GTF2F1P35269 517 aaKnown RBP eCLIP3.75□□□□□ -1.81
APP-207ENST00000415997 RRP1P56182 461 aaKnown RBP3.75□□□□□ -1.81
APP-207ENST00000415997 ZNF445P59923 1031 aa3.75□□□□□ -1.81
APP-207ENST00000415997 DEFB103AP81534 67 aa3.75□□□□□ -1.81
APP-207ENST00000415997 HTRA4P83105 476 aaPredicted RBP3.75□□□□□ -1.81
APP-207ENST00000415997 EPC2Q52LR7 807 aa3.75□□□□□ -1.81
APP-207ENST00000415997 UNQ6494/PRO21346Q6UXR6 183 aa3.75□□□□□ -1.81
APP-207ENST00000415997 CYP2R1Q6VVX0 501 aa3.75□□□□□ -1.81
APP-207ENST00000415997 CATSPERGQ6ZRH7 1159 aa3.75□□□□□ -1.81
APP-207ENST00000415997 SND1Q7KZF4 910 aaKnown RBP eCLIP3.75□□□□□ -1.811e-7■■■□□ 15.7
APP-207ENST00000415997 DEFB128Q7Z7B8 93 aa3.75□□□□□ -1.81
APP-207ENST00000415997 B3GNT8Q7Z7M8 397 aa3.75□□□□□ -1.81
APP-207ENST00000415997 CABP7Q86V35 215 aa3.75□□□□□ -1.81
APP-207ENST00000415997 FIBCD1Q8N539 461 aa3.75□□□□□ -1.81
APP-207ENST00000415997 TET1Q8NFU7 2136 aa3.75□□□□□ -1.81
APP-207ENST00000415997 DDX11Q96FC9 970 aa3.75□□□□□ -1.81
APP-207ENST00000415997 BBC3Q96PG8 261 aaPredicted RBP3.75□□□□□ -1.81
APP-207ENST00000415997 NOL6Q9H6R4 1146 aaKnown RBP3.75□□□□□ -1.81
APP-207ENST00000415997 PHAXQ9H814 394 aaKnown RBP3.75□□□□□ -1.81
APP-207ENST00000415997 TMOD4Q9NZQ9 345 aa3.75□□□□□ -1.81
APP-207ENST00000415997 NTMQ9P121 344 aa3.75□□□□□ -1.81
APP-207ENST00000415997 ANKFY1Q9P2R3 1169 aa3.75□□□□□ -1.81
APP-207ENST00000415997 CNOT11Q9UKZ1 510 aaKnown RBP3.75□□□□□ -1.81
APP-207ENST00000415997 DIS3Q9Y2L1 958 aaKnown RBP3.75□□□□□ -1.81
APP-207ENST00000415997 COL12A1Q99715 3063 aa3.75□□□□□ -1.81
APP-207ENST00000415997 TANC1Q9C0D5 1861 aa3.75□□□□□ -1.81
APP-207ENST00000415997 MROH5Q6ZUA9 1318 aa3.74□□□□□ -1.81
APP-207ENST00000415997 ANKRD18BA2A2Z9 1011 aa3.74□□□□□ -1.81
APP-207ENST00000415997 TMEM8BA6NDV4 472 aa3.74□□□□□ -1.81
APP-207ENST00000415997 CHL1O00533 1208 aa3.74□□□□□ -1.81
APP-207ENST00000415997 TNFRSF10CO14798 259 aa3.74□□□□□ -1.81
APP-207ENST00000415997 SHOXO15266 292 aa3.74□□□□□ -1.81
APP-207ENST00000415997 SMARCA5O60264 1052 aaPredicted RBP3.74□□□□□ -1.81
APP-207ENST00000415997 CABYRO75952 493 aa3.74□□□□□ -1.81
APP-207ENST00000415997 SNAI1O95863 264 aaPredicted RBP3.74□□□□□ -1.81
APP-207ENST00000415997 IQCF3P0C7M6 154 aa3.74□□□□□ -1.81
APP-207ENST00000415997 LINC00271P0C7V0 271 aa3.74□□□□□ -1.81
APP-207ENST00000415997 ERCC3P19447 782 aa3.74□□□□□ -1.81
APP-207ENST00000415997 CHAF1AQ13111 956 aaPredicted RBP3.74□□□□□ -1.81
APP-207ENST00000415997 ITGA7Q13683 1181 aa3.74□□□□□ -1.81
APP-207ENST00000415997 TCTN1Q2MV58 587 aa3.74□□□□□ -1.81
APP-207ENST00000415997 AXDND1Q5T1B0 1012 aaPredicted RBP3.74□□□□□ -1.81
APP-207ENST00000415997 N4BP2L1Q5TBK1 243 aaPredicted RBP3.74□□□□□ -1.81
APP-207ENST00000415997 WDR78Q5VTH9 848 aa3.74□□□□□ -1.81
APP-207ENST00000415997 CPZQ66K79 652 aa3.74□□□□□ -1.81
APP-207ENST00000415997 MAMDC4Q6UXC1 1216 aa3.74□□□□□ -1.81
APP-207ENST00000415997 STK32CQ86UX6 486 aa3.74□□□□□ -1.81
APP-207ENST00000415997 METTL16Q86W50 562 aaKnown RBP3.74□□□□□ -1.81
APP-207ENST00000415997 ZNF761Q86XN6 746 aaPredicted RBP3.74□□□□□ -1.81
APP-207ENST00000415997 REXO1Q8N1G1 1221 aaKnown RBP3.74□□□□□ -1.81
APP-207ENST00000415997 MSL3Q8N5Y2 521 aaKnown RBP3.74□□□□□ -1.81
APP-207ENST00000415997 KREMEN2Q8NCW0 462 aa3.74□□□□□ -1.81
APP-207ENST00000415997 ALDH8A1Q9H2A2 487 aaPredicted RBP3.74□□□□□ -1.81
APP-207ENST00000415997 SMOC2Q9H3U7 446 aa3.74□□□□□ -1.81
APP-207ENST00000415997 GP6Q9HCN6 339 aa3.74□□□□□ -1.81
APP-207ENST00000415997 SPATA6Q9NWH7 488 aaPredicted RBP3.74□□□□□ -1.81
APP-207ENST00000415997 SLC5A4Q9NY91 659 aa3.74□□□□□ -1.81
APP-207ENST00000415997 SF3B6Q9Y3B4 125 aaKnown RBP3.74□□□□□ -1.81
APP-207ENST00000415997 USP15Q9Y4E8 981 aaPredicted RBP3.74□□□□□ -1.81
APP-207ENST00000415997 ASTN1O14525 1302 aa3.73□□□□□ -1.81
APP-207ENST00000415997 KIF16BQ96L93 1317 aa3.73□□□□□ -1.81
APP-207ENST00000415997 CLSPNQ9HAW4 1339 aa3.73□□□□□ -1.81
APP-207ENST00000415997 SIPA1L1O43166 1804 aa3.73□□□□□ -1.81
APP-207ENST00000415997 C5orf67F2Z3F1 127 aa3.73□□□□□ -1.81
APP-207ENST00000415997 FRAT2O75474 233 aaPredicted RBP3.73□□□□□ -1.81
APP-207ENST00000415997 GLP2RO95838 553 aa3.73□□□□□ -1.81
APP-207ENST00000415997 CXCL10P02778 98 aa3.73□□□□□ -1.81
APP-207ENST00000415997 ASNSP08243 561 aa3.73□□□□□ -1.81
APP-207ENST00000415997 C6orf222P0C671 652 aaPredicted RBP3.73□□□□□ -1.81
APP-207ENST00000415997 SP9P0CG40 484 aa3.73□□□□□ -1.81
APP-207ENST00000415997 ZNF20P17024 532 aa3.73□□□□□ -1.81
APP-207ENST00000415997 PRDX5P30044 214 aa3.73□□□□□ -1.81
APP-207ENST00000415997 HMGA2P52926 109 aa3.73□□□□□ -1.81
APP-207ENST00000415997 PMS1P54277 932 aaKnown RBP3.73□□□□□ -1.81
APP-207ENST00000415997 RHBDL3P58872 404 aa3.73□□□□□ -1.81
APP-207ENST00000415997 POU4F1Q01851 419 aa3.73□□□□□ -1.81
APP-207ENST00000415997 SRSF1Q07955 248 aaKnown RBP eCLIP3.73□□□□□ -1.81
APP-207ENST00000415997 CAMK1Q14012 370 aa3.73□□□□□ -1.81
APP-207ENST00000415997 GCKRQ14397 625 aa3.73□□□□□ -1.81
APP-207ENST00000415997 SHROOM1Q2M3G4 852 aaPredicted RBP3.73□□□□□ -1.81
APP-207ENST00000415997 DPY19L1Q2PZI1 675 aa3.73□□□□□ -1.81
APP-207ENST00000415997 LARP1BQ659C4 914 aaKnown RBP3.73□□□□□ -1.81
APP-207ENST00000415997 CXCL17Q6UXB2 119 aa3.73□□□□□ -1.81
APP-207ENST00000415997 EP400NLQ6ZTU2 488 aa3.73□□□□□ -1.81
APP-207ENST00000415997 HS2ST1Q7LGA3 356 aa3.73□□□□□ -1.81
APP-207ENST00000415997 UBE3BQ7Z3V4 1068 aa3.73□□□□□ -1.81
APP-207ENST00000415997 PPFIBP1Q86W92 1011 aa3.73□□□□□ -1.81
APP-207ENST00000415997 CPNE8Q86YQ8 564 aa3.73□□□□□ -1.81
APP-207ENST00000415997 LZTR1Q8N653 840 aa3.73□□□□□ -1.81
APP-207ENST00000415997 VGLL2Q8N8G2 317 aa3.73□□□□□ -1.81
APP-207ENST00000415997 ADCY4Q8NFM4 1077 aa3.73□□□□□ -1.81
APP-207ENST00000415997 MAP4K1Q92918 833 aa3.73□□□□□ -1.81
APP-207ENST00000415997 RPGRIP1Q96KN7 1286 aa3.73□□□□□ -1.81
APP-207ENST00000415997 SAMD11Q96NU1 681 aa3.73□□□□□ -1.81
APP-207ENST00000415997 SYT3Q9BQG1 590 aa3.73□□□□□ -1.81
APP-207ENST00000415997 KATNBL1Q9H079 304 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms