RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ASIC4Q96FT7 647 aa22.39■■□□□ 1.18
PTPRU-203ENST00000415600 ACAP3Q96P50 834 aa22.39■■□□□ 1.18
PTPRU-203ENST00000415600 PAAF1Q9BRP4 392 aa22.39■■□□□ 1.18
PTPRU-203ENST00000415600 IRF2BPLQ9H1B7 796 aa22.39■■□□□ 1.18
PTPRU-203ENST00000415600 IGSF9Q9P2J2 1179 aa22.39■■□□□ 1.18
PTPRU-203ENST00000415600 RCOR1Q9UKL0 485 aa22.39■■□□□ 1.18
PTPRU-203ENST00000415600 TRIOO75962 3097 aa22.39■■□□□ 1.17
PTPRU-203ENST00000415600 ZNF318Q5VUA4 2279 aa22.39■■□□□ 1.17
PTPRU-203ENST00000415600 EDN1P05305 212 aa22.38■■□□□ 1.17
PTPRU-203ENST00000415600 PLA2G4BP0C869 781 aa22.38■■□□□ 1.17
PTPRU-203ENST00000415600 NUBP1P53384 320 aa22.38■■□□□ 1.17
PTPRU-203ENST00000415600 MPZL3Q6UWV2 235 aa22.38■■□□□ 1.17
PTPRU-203ENST00000415600 GLYCTKQ8IVS8 523 aa22.38■■□□□ 1.17
PTPRU-203ENST00000415600 PPP1R10Q96QC0 940 aaKnown RBP22.38■■□□□ 1.17
PTPRU-203ENST00000415600 USP28Q96RU2 1077 aa22.38■■□□□ 1.17
PTPRU-203ENST00000415600 CDT1Q9H211 546 aa22.38■■□□□ 1.17
PTPRU-203ENST00000415600 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.38■■□□□ 1.17
PTPRU-203ENST00000415600 CLUHO75153 1309 aa22.38■■□□□ 1.17
PTPRU-203ENST00000415600 SLC16A4O15374 487 aa22.38■■□□□ 1.17
PTPRU-203ENST00000415600 GBP2P32456 591 aaPredicted RBP22.38■■□□□ 1.17
PTPRU-203ENST00000415600 PTPN5P54829 565 aa22.38■■□□□ 1.17
PTPRU-203ENST00000415600 RTP2Q5QGT7 225 aa22.38■■□□□ 1.17
PTPRU-203ENST00000415600 L1TD1Q5T7N2 865 aaKnown RBP22.38■■□□□ 1.17
PTPRU-203ENST00000415600 TARS2Q9BW92 718 aaKnown RBP22.38■■□□□ 1.17
PTPRU-203ENST00000415600 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.38■■□□□ 1.17
PTPRU-203ENST00000415600 TOM1L1O75674 476 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 ASGR2P07307 311 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 SPATA31D3P0C874 917 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 HOXD11P31277 338 aaPredicted RBP22.37■■□□□ 1.17
PTPRU-203ENST00000415600 ABCD1P33897 745 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 LONP1P36776 959 aaKnown RBP22.37■■□□□ 1.17
PTPRU-203ENST00000415600 MAPK7Q13164 816 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 NAB2Q15742 525 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 GLRA4Q5JXX5 417 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 PRSS55Q6UWB4 352 aaPredicted RBP22.37■■□□□ 1.17
PTPRU-203ENST00000415600 ZPBP2Q6X784 338 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 SPATA31D4Q6ZUB0 917 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 KCNK18Q7Z418 384 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 PRKD2Q9BZL6 878 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 MFSD1Q9H3U5 465 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 PTPRHQ9HD43 1115 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 ODF2LQ9ULJ1 636 aa22.37■■□□□ 1.17
PTPRU-203ENST00000415600 SMIM28A0A1B0GU29 152 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 RFPL2O75678 378 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 ZMYND10O75800 440 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 HNRNPA1P09651 372 aaKnown RBP eCLIP22.36■■□□□ 1.17
PTPRU-203ENST00000415600 RPL17P18621 184 aaKnown RBP22.36■■□□□ 1.17
PTPRU-203ENST00000415600 MATR3P43243 847 aaKnown RBP eCLIP22.36■■□□□ 1.17
PTPRU-203ENST00000415600 SLC12A3P55017 1021 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 RAD51AP2Q09MP3 1159 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 TDGQ13569 410 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 TMEM119Q4V9L6 283 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 LILRA6Q6PI73 481 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 RTL10Q7L3V2 364 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 NXPE3Q969Y0 559 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 PNMA5Q96PV4 448 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 PLIN2Q99541 437 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 CACNG4Q9UBN1 327 aa22.36■■□□□ 1.17
PTPRU-203ENST00000415600 SFI1A8K8P3 1242 aa22.35■■□□□ 1.17
PTPRU-203ENST00000415600 XYLBO75191 536 aa22.35■■□□□ 1.17
PTPRU-203ENST00000415600 PAPLNO95428 1278 aa22.35■■□□□ 1.17
PTPRU-203ENST00000415600 RPL9P32969 192 aaKnown RBP22.35■■□□□ 1.17
PTPRU-203ENST00000415600 OSTNP61366 133 aa22.35■■□□□ 1.17
PTPRU-203ENST00000415600 NOLC1Q14978 699 aaKnown RBP eCLIP22.35■■□□□ 1.17
PTPRU-203ENST00000415600 KYAT1Q16773 422 aa22.35■■□□□ 1.17
PTPRU-203ENST00000415600 UPP1Q16831 310 aa22.35■■□□□ 1.17
PTPRU-203ENST00000415600 CCDC183Q5T5S1 534 aa22.35■■□□□ 1.17
PTPRU-203ENST00000415600 ANKS3Q6ZW76 656 aa22.35■■□□□ 1.17
PTPRU-203ENST00000415600 LNX1Q8TBB1 728 aaPredicted RBP22.35■■□□□ 1.17
PTPRU-203ENST00000415600 BICD1Q96G01 975 aa22.35■■□□□ 1.17
PTPRU-203ENST00000415600 ANKFY1Q9P2R3 1169 aa22.35■■□□□ 1.17
PTPRU-203ENST00000415600 FBXW11Q9UKB1 542 aa22.35■■□□□ 1.17
PTPRU-203ENST00000415600 MYO10Q9HD67 2058 aa22.34■■□□□ 1.17
PTPRU-203ENST00000415600 GOLGA6L4A6NEF3 574 aa22.34■■□□□ 1.17
PTPRU-203ENST00000415600 CLDN3O15551 220 aa22.34■■□□□ 1.17
PTPRU-203ENST00000415600 KRT18P05783 430 aaKnown RBP22.34■■□□□ 1.17
PTPRU-203ENST00000415600 HARSP12081 509 aaKnown RBP22.34■■□□□ 1.17
PTPRU-203ENST00000415600 PROZP22891 400 aa22.34■■□□□ 1.17
PTPRU-203ENST00000415600 CLCNKBP51801 687 aa22.34■■□□□ 1.17
PTPRU-203ENST00000415600 NHLH1Q02575 133 aa22.34■■□□□ 1.17
PTPRU-203ENST00000415600 XKR4Q5GH76 650 aa22.34■■□□□ 1.17
PTPRU-203ENST00000415600 PPM1LQ5SGD2 360 aa22.34■■□□□ 1.17
PTPRU-203ENST00000415600 GAS2L3Q86XJ1 694 aa22.34■■□□□ 1.17
PTPRU-203ENST00000415600 TMEM161BQ8NDZ6 487 aa22.34■■□□□ 1.17
PTPRU-203ENST00000415600 SNX27Q96L92 541 aa22.34■■□□□ 1.17
PTPRU-203ENST00000415600 CLSTN3Q9BQT9 956 aa22.34■■□□□ 1.17
PTPRU-203ENST00000415600 ZFP37Q9Y6Q3 630 aaPredicted RBP22.34■■□□□ 1.17
PTPRU-203ENST00000415600 YEATS4O95619 227 aa22.33■■□□□ 1.17
PTPRU-203ENST00000415600 MYBP10242 640 aa22.33■■□□□ 1.17
PTPRU-203ENST00000415600 MAPTP10636 758 aaKnown RBP22.33■■□□□ 1.17
PTPRU-203ENST00000415600 KCNE1P15382 129 aa22.33■■□□□ 1.17
PTPRU-203ENST00000415600 FGFR3P22607 806 aa22.33■■□□□ 1.17
PTPRU-203ENST00000415600 AVPR2P30518 371 aa22.33■■□□□ 1.17
PTPRU-203ENST00000415600 HOXA9P31269 272 aa22.33■■□□□ 1.17
PTPRU-203ENST00000415600 ALKAL1Q6UXT8 129 aa22.33■■□□□ 1.17
PTPRU-203ENST00000415600 KCNK12Q9HB15 430 aa22.33■■□□□ 1.17
PTPRU-203ENST00000415600 EPS15L1Q9UBC2 864 aa22.33■■□□□ 1.17
PTPRU-203ENST00000415600 FBXL21Q9UKT6 434 aa22.33■■□□□ 1.17
PTPRU-203ENST00000415600 NUB1Q9Y5A7 615 aa22.33■■□□□ 1.17
PTPRU-203ENST00000415600 DENND4AQ7Z401 1863 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms