RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 TBC1D12O60347 775 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 GRIN3BO60391 1043 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 ACSL3O95573 720 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 TTC4O95801 387 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 POTEJP0CG39 1038 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 CETPP11597 493 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 CENPCQ03188 943 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 KRT17Q04695 432 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 MGAT5Q09328 741 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 SNRNP35Q16560 246 aaKnown RBP10.45□□□□□ -0.74
CD44-206ENST00000415148 CLEC16AQ2KHT3 1053 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 SGO2Q562F6 1265 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 PCNX4Q63HM2 1172 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 CEP128Q6ZU80 1094 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 PRUNE1Q86TP1 453 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 ZNF677Q86XU0 584 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 MCF2L2Q86YR7 1114 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 RELL1Q8IUW5 271 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 FBXL13Q8NEE6 735 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 GDAP1Q8TB36 358 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 CCHCR1Q8TD31 782 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 ARHGEF2Q92974 986 aaKnown RBP10.45□□□□□ -0.74
CD44-206ENST00000415148 L3MBTL3Q96JM7 780 aaPredicted RBP10.45□□□□□ -0.74
CD44-206ENST00000415148 RMDN2Q96LZ7 410 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 MFSD14AQ96MC6 490 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 ECT2Q9H8V3 914 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 RAB20Q9NX57 234 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 ZBTB21Q9ULJ3 1066 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.45□□□□□ -0.74
CD44-206ENST00000415148 USP15Q9Y4E8 981 aaPredicted RBP10.45□□□□□ -0.74
CD44-206ENST00000415148 EP400Q96L91 3159 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 SUN1O94901 812 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 UPP2O95045 317 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
CD44-206ENST00000415148 ICAM1P05362 532 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 ADRB2P07550 413 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 NQO1P15559 274 aaKnown RBP10.45□□□□□ -0.74
CD44-206ENST00000415148 IVDP26440 423 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 YWHABP31946 246 aaKnown RBP10.45□□□□□ -0.74
CD44-206ENST00000415148 MAP2K1Q02750 393 aaPredicted RBP10.45□□□□□ -0.74
CD44-206ENST00000415148 NAA25Q14CX7 972 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 ZKSCAN8Q15776 578 aaPredicted RBP10.45□□□□□ -0.74
CD44-206ENST00000415148 MEX3CQ5U5Q3 659 aaKnown RBP10.45□□□□□ -0.74
CD44-206ENST00000415148 MAEAQ7L5Y9 396 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 CYP4X1Q8N118 509 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 ANKRD42Q8N9B4 389 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 ATL2Q8NHH9 583 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 C7orf43Q8WVR3 580 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 SEMA4DQ92854 862 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 ZNF622Q969S3 477 aaKnown RBP eCLIP10.45□□□□□ -0.74
CD44-206ENST00000415148 FBXL18Q96ME1 805 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 HERPUD2Q9BSE4 406 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 TRAIPQ9BWF2 469 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 EBF2Q9HAK2 575 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 C17orf75Q9HAS0 396 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 TBX20Q9UMR3 447 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 ZNFX1Q9P2E3 1918 aaKnown RBP10.45□□□□□ -0.74
CD44-206ENST00000415148 A0A1B0GUA9 196 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 SORBS3O60504 671 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 GAS8O95995 478 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 MAPK4P31152 587 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 GBP2P32456 591 aaPredicted RBP10.44□□□□□ -0.74
CD44-206ENST00000415148 PTGER2P43116 358 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 PEX3P56589 373 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 GCNT1Q02742 428 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 AOC3Q16853 763 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 TKFCQ3LXA3 575 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 GALNTL6Q49A17 601 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 NSMFQ6X4W1 530 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 ERICH1Q86X53 443 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 MAP4K3Q8IVH8 894 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 FITM2Q8N6M3 262 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 DYDC1Q8WWB3 177 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 C1orf54Q8WWF1 131 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 CKAP2Q8WWK9 683 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 DHX38Q92620 1227 aaKnown RBP10.44□□□□□ -0.74
CD44-206ENST00000415148 NTPCRQ9BSD7 190 aaKnown RBP10.44□□□□□ -0.74
CD44-206ENST00000415148 FOXP3Q9BZS1 431 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 LGALS13Q9UHV8 139 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 ACTL7BQ9Y614 415 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 TMEM120BA0PK00 339 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 DDX39AO00148 427 aaKnown RBP10.44□□□□□ -0.74
CD44-206ENST00000415148 SLC16A4O15374 487 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 CLDN3O15551 220 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 UNGP13051 313 aaPredicted RBP10.44□□□□□ -0.74
CD44-206ENST00000415148 CNGA1P29973 690 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 SFNP31947 248 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 PSMC5P62195 406 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 SNX1Q13596 522 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 ZNF268Q14587 947 aaPredicted RBP10.44□□□□□ -0.74
CD44-206ENST00000415148 TRIP13Q15645 432 aaPredicted RBP10.44□□□□□ -0.74
CD44-206ENST00000415148 TBC1D10BQ4KMP7 808 aaPredicted RBP10.44□□□□□ -0.74
CD44-206ENST00000415148 FLAD1Q8NFF5 587 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 DCLK3Q9C098 648 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 ASIC3Q9UHC3 531 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 STK38LQ9Y2H1 464 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 C15orf41Q9Y2V0 281 aa10.44□□□□□ -0.74
CD44-206ENST00000415148 RGPD3A6NKT7 1758 aaPredicted RBP10.43□□□□□ -0.74
CD44-206ENST00000415148 RGPD4Q7Z3J3 1758 aa10.43□□□□□ -0.74
CD44-206ENST00000415148 KIF1CO43896 1103 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms