RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 KCNT2Q6UVM3 1135 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 ZNF280BQ86YH2 543 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 CBWD2Q8IUF1 395 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 GPR65Q8IYL9 337 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 RNF168Q8IYW5 571 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-207ENST00000415107 SLC39A11Q8N1S5 342 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 COLGALT1Q8NBJ5 622 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 SAAL1Q96ER3 474 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 DDX27Q96GQ7 796 aaKnown RBP12.94□□□□□ -0.34
ATG4B-207ENST00000415107 CEP63Q96MT8 703 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 FAM213AQ9BRX8 229 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 LMAN2LQ9H0V9 348 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 TTYH1Q9H313 450 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-207ENST00000415107 KLK14Q9P0G3 267 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 RWDD2AQ9UIY3 292 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 MAPK8IP1Q9UQF2 711 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 INPP5FQ9Y2H2 1132 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 PCDHB12Q9Y5F1 795 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 CDH23Q9H251 3354 aa12.94□□□□□ -0.34
ATG4B-207ENST00000415107 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-207ENST00000415107 BIN1O00499 593 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 ZC3H11AO75152 810 aaKnown RBP eCLIP12.93□□□□□ -0.34
ATG4B-207ENST00000415107 ALDH7A1P49419 539 aaKnown RBP12.93□□□□□ -0.34
ATG4B-207ENST00000415107 PMS1P54277 932 aaKnown RBP12.93□□□□□ -0.34
ATG4B-207ENST00000415107 BCAR1P56945 870 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 NFKBIBQ15653 356 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 SPATA1Q5VX52 437 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 INTS8Q75QN2 995 aaKnown RBP12.93□□□□□ -0.34
ATG4B-207ENST00000415107 USP37Q86T82 979 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 WDR49Q8IV35 697 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 ZSWIM2Q8NEG5 633 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 TMC2Q8TDI7 906 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 LRCH3Q96II8 777 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 FAM193BQ96PV7 902 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-207ENST00000415107 C17orf80Q9BSJ5 609 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 CXCL16Q9H2A7 254 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 PCIF1Q9H4Z3 704 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 LMCD1Q9NZU5 365 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 FRMD4BQ9Y2L6 1034 aa12.93□□□□□ -0.34
ATG4B-207ENST00000415107 SZT2Q5T011 3432 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 CETN3O15182 167 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 AKAP3O75969 853 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 ALDH2P05091 517 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 IBSPP21815 317 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-207ENST00000415107 CTNNB1P35222 781 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 PSMC2P35998 433 aaKnown RBP12.92□□□□□ -0.34
ATG4B-207ENST00000415107 SLC11A1P49279 550 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 CYP2J2P51589 502 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 AP3M2P53677 418 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 MARSP56192 900 aaKnown RBP12.92□□□□□ -0.34
ATG4B-207ENST00000415107 ADAM9Q13443 819 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 TMEM132DQ14C87 1099 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 UPP1Q16831 310 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 DPCR1Q3MIW9 517 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 GLRA4Q5JXX5 417 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 ANKRD40Q6AI12 368 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 JADE1Q6IE81 842 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 CAVIN1Q6NZI2 390 aaKnown RBP12.92□□□□□ -0.34
ATG4B-207ENST00000415107 EFCAB13Q8IY85 973 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 FBXO22Q8NEZ5 403 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 PARD3BQ8TEW8 1205 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 NELFBQ8WX92 580 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 BORCS6Q96GS4 357 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 IGSF21Q96ID5 467 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 CGRRF1Q99675 332 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 GZF1Q9H116 711 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-207ENST00000415107 MARCH5Q9NX47 278 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 SPG21Q9NZD8 308 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 HCSTQ9UBK5 93 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 DNAJB4Q9UDY4 337 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 TRANK1O15050 2925 aa12.92□□□□□ -0.34
ATG4B-207ENST00000415107 ANO9A1A5B4 782 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 GOLGA8IPA6NC78 632 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 TRIM49BA6NDI0 452 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 GOLGA8JA6NMD2 632 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 NRP1O14786 923 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 IKBKBO14920 756 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 LPXNO60711 386 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 GNA14O95837 355 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 NFICP08651 508 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 AARSP49588 968 aaKnown RBP eCLIP12.91□□□□□ -0.34
ATG4B-207ENST00000415107 WNT7BP56706 349 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 SOX4Q06945 474 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-207ENST00000415107 ELAVL2Q12926 359 aaKnown RBP12.91□□□□□ -0.34
ATG4B-207ENST00000415107 STX1AQ16623 288 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 ISM2Q6H9L7 571 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 PDE12Q6L8Q7 609 aaKnown RBP12.91□□□□□ -0.34
ATG4B-207ENST00000415107 DCLRE1AQ6PJP8 1040 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 SPRED2Q7Z698 418 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 FILIP1Q7Z7B0 1213 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 DDX53Q86TM3 631 aaKnown RBP12.91□□□□□ -0.34
ATG4B-207ENST00000415107 BEST2Q8NFU1 509 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 CXorf38Q8TB03 319 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 CACTINQ8WUQ7 758 aaKnown RBP12.91□□□□□ -0.34
ATG4B-207ENST00000415107 KIF12Q96FN5 646 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 DUSP9Q99956 384 aaKnown RBP12.91□□□□□ -0.34
ATG4B-207ENST00000415107 FUCA2Q9BTY2 467 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 COLEC11Q9BWP8 271 aa12.91□□□□□ -0.34
ATG4B-207ENST00000415107 METTL14Q9HCE5 456 aaKnown RBP12.91□□□□□ -0.34
ATG4B-207ENST00000415107 INTS13Q9NVM9 706 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms