RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 APOL3O95236 402 aa5.78□□□□□ -1.48
PTPRK-209ENST00000415046 F2P00734 622 aa5.78□□□□□ -1.48
PTPRK-209ENST00000415046 POU3F2P20265 443 aaPredicted RBP5.78□□□□□ -1.48
PTPRK-209ENST00000415046 DSG1Q02413 1049 aa5.78□□□□□ -1.48
PTPRK-209ENST00000415046 TNS2Q63HR2 1409 aa5.78□□□□□ -1.48
PTPRK-209ENST00000415046 Q6ZPA2 131 aa5.78□□□□□ -1.48
PTPRK-209ENST00000415046 MRGPRGQ86SM5 289 aa5.78□□□□□ -1.48
PTPRK-209ENST00000415046 ELOA2Q8IYF1 753 aaPredicted RBP5.78□□□□□ -1.48
PTPRK-209ENST00000415046 MDGA1Q8NFP4 955 aa5.78□□□□□ -1.48
PTPRK-209ENST00000415046 PPP1R14CQ8TAE6 165 aa5.78□□□□□ -1.48
PTPRK-209ENST00000415046 HIST1H2AHQ96KK5 128 aa5.78□□□□□ -1.48
PTPRK-209ENST00000415046 HIST1H2AJQ99878 128 aa5.78□□□□□ -1.48
PTPRK-209ENST00000415046 KIF24Q5T7B8 1368 aa5.78□□□□□ -1.48
PTPRK-209ENST00000415046 NPC1L1Q9UHC9 1359 aa5.78□□□□□ -1.48
PTPRK-209ENST00000415046 COL3A1P02461 1466 aaPredicted RBP5.77□□□□□ -1.49
PTPRK-209ENST00000415046 XDHP47989 1333 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 NUP188Q5SRE5 1749 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 TAF1LQ8IZX4 1826 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 TUBGCP6Q96RT7 1819 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 GOLGA6L6A8MZA4 724 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 KPNA6O60684 536 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 GAS7O60861 476 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 FSBPO95073 299 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 KRT4P19013 534 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 CD40P25942 277 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 NPEPPSP55786 919 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 EIF4A2Q14240 407 aaKnown RBP5.77□□□□□ -1.49
PTPRK-209ENST00000415046 LRRC32Q14392 662 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 TCEA2Q15560 299 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 CCDC144BQ3MJ40 725 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 NAIF1Q69YI7 327 aaPredicted RBP5.77□□□□□ -1.49
PTPRK-209ENST00000415046 KRT27Q7Z3Y8 459 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 ULK2Q8IYT8 1036 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 UNC5BQ8IZJ1 945 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 ATXN2LQ8WWM7 1075 aaKnown RBP5.77□□□□□ -1.49
PTPRK-209ENST00000415046 ARL8AQ96BM9 186 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 MNTQ99583 582 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 NOL10Q9BSC4 688 aaKnown RBP5.77□□□□□ -1.49
PTPRK-209ENST00000415046 USP36Q9P275 1121 aaKnown RBP5.77□□□□□ -1.49
PTPRK-209ENST00000415046 TRPS1Q9UHF7 1281 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 RREB1Q92766 1687 aa5.77□□□□□ -1.49
PTPRK-209ENST00000415046 RGPD3A6NKT7 1758 aaPredicted RBP5.76□□□□□ -1.49
PTPRK-209ENST00000415046 RGPD4Q7Z3J3 1758 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 GRXCR1A8MXD5 290 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 MFAP3LO75121 409 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 GAAP10253 952 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 IL2RBP14784 551 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 PPP2R1AP30153 589 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 MTHFSP49914 203 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 DDB1Q16531 1140 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 DCAF17Q5H9S7 520 aaPredicted RBP5.76□□□□□ -1.49
PTPRK-209ENST00000415046 RABL3Q5HYI8 236 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 APBB1IPQ7Z5R6 666 aaPredicted RBP5.76□□□□□ -1.49
PTPRK-209ENST00000415046 MB21D1Q8N884 522 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 RNPC3Q96LT9 517 aaKnown RBP5.76□□□□□ -1.49
PTPRK-209ENST00000415046 UIMC1Q96RL1 719 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 ENKD1Q9H0I2 346 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 IFT57Q9NWB7 429 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 NCDNQ9UBB6 729 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 THRAP3Q9Y2W1 955 aaKnown RBP5.76□□□□□ -1.49
PTPRK-209ENST00000415046 PCDHB6Q9Y5E3 794 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 CD2APQ9Y5K6 639 aa5.76□□□□□ -1.49
PTPRK-209ENST00000415046 SIPA1L3O60292 1781 aaPredicted RBP5.75□□□□□ -1.49
PTPRK-209ENST00000415046 OVOS2A0A0G2JMS6 1433 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 LY75O60449 1722 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 ZNF891A8MT65 544 aaPredicted RBP5.75□□□□□ -1.49
PTPRK-209ENST00000415046 ELL2O00472 640 aaPredicted RBP5.75□□□□□ -1.49
PTPRK-209ENST00000415046 NRP1O14786 923 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 STC2O76061 302 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 PTGS2P35354 604 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 GPR158Q5T848 1215 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 LRRTM3Q86VH5 581 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 HOMER1Q86YM7 354 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 PASD1Q8IV76 773 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 NXPE1Q8N323 547 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 PIK3C3Q8NEB9 887 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 SLC25A43Q8WUT9 341 aaPredicted RBP5.75□□□□□ -1.49
PTPRK-209ENST00000415046 CHTF18Q8WVB6 975 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 RAPGEF4Q8WZA2 1011 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 ST8SIA2Q92186 375 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 UBXN4Q92575 508 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 LENG9Q96B70 501 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 AGAP2Q99490 1192 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 MTFR1LQ9H019 292 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 PIF1Q9H611 641 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 NRDE2Q9H7Z3 1164 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.75□□□□□ -1.49
PTPRK-209ENST00000415046 PARD3Q8TEW0 1356 aa5.75□□□□□ -1.49
PTPRK-209ENST00000415046 MYPNQ86TC9 1320 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 EXOC5O00471 708 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 TGM5O43548 720 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 FAM20BO75063 409 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 RPS6KA4O75676 772 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 ALDH1A2O94788 518 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 PCDH8O95206 1070 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 HMOX1P09601 288 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 GNAT2P19087 354 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 ZBTB41Q5SVQ8 909 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 RHOUQ7L0Q8 258 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms