RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 FGBP02675 491 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 AFPP02771 609 aaKnown RBP14.39□□□□□ -0.11
CNN3-203ENST00000415017 TRIM49P0CI25 452 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 TRIM49CP0CI26 452 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 ACRP10323 421 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 SYN1P17600 705 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 CYP3A5P20815 502 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 CDK11BP21127 795 aaKnown RBP14.39□□□□□ -0.11
CNN3-203ENST00000415017 MTIF2P46199 727 aaKnown RBP14.39□□□□□ -0.11
CNN3-203ENST00000415017 FMO5P49326 533 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 AFF1P51825 1210 aaKnown RBP14.39□□□□□ -0.11
CNN3-203ENST00000415017 YARSP54577 528 aaKnown RBP14.39□□□□□ -0.11
CNN3-203ENST00000415017 CBWD6Q4V339 395 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 CBWD3Q5JTY5 395 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 CBWD5Q5RIA9 395 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 JADE1Q6IE81 842 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 ZNF365Q70YC5 407 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 OR5B17Q8NGF7 314 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 LMO3Q8TAP4 145 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 CCDC127Q96BQ5 260 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 ZNF689Q96CS4 500 aaPredicted RBP14.39□□□□□ -0.11
CNN3-203ENST00000415017 ZFP42Q96MM3 310 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 ERGIC2Q96RQ1 377 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 TMEM117Q9H0C3 514 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 RSAD1Q9HA92 442 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 TMEM8AQ9HCN3 771 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 TAB2Q9NYJ8 693 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 ZMYND8Q9ULU4 1186 aaPredicted RBP14.39□□□□□ -0.11
CNN3-203ENST00000415017 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.39□□□□□ -0.11
CNN3-203ENST00000415017 PDE4DIPQ5VU43 2346 aa14.39□□□□□ -0.11
CNN3-203ENST00000415017 KIAA1671Q9BY89 1806 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 VNN1O95497 513 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 NFICP08651 508 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 ACTN1P12814 892 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 DUOXA2Q1HG44 320 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 EPC2Q52LR7 807 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 TDRD10Q5VZ19 366 aaKnown RBP14.38□□□□□ -0.11
CNN3-203ENST00000415017 SV2AQ7L0J3 742 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 ANKRD20A12PQ8NF67 263 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 CASD1Q96PB1 797 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 GAD1Q99259 594 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 GDF15Q99988 308 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 VPS16Q9H269 839 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 PARP2Q9UGN5 583 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 PLAGL2Q9UPG8 496 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 GBF1Q92538 1859 aa14.38□□□□□ -0.11
CNN3-203ENST00000415017 A0A1W2PQC6 194 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 ANO9A1A5B4 782 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 TEX33O43247 280 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 HOXA2O43364 376 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 DGKIO75912 1065 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 SLC34A2O95436 690 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 LRPAP1P30533 357 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 MLH1P40692 756 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 GCLMP48507 274 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 MRE11P49959 708 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 DEFB103AP81534 67 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 HTRA4P83105 476 aaPredicted RBP14.37□□□□□ -0.11
CNN3-203ENST00000415017 SOX4Q06945 474 aaPredicted RBP14.37□□□□□ -0.11
CNN3-203ENST00000415017 DSC1Q08554 894 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 KCNMA1Q12791 1236 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 KRT39Q6A163 491 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 SCARA3Q6AZY7 606 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 TRAPPC11Q7Z392 1133 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 C1orf127Q8N9H9 656 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 MRFAP1L1Q96HT8 127 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 FNBP1Q96RU3 617 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 KLK14Q9P0G3 267 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 IFNKQ9P0W0 207 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 SIX4Q9UIU6 781 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 SIK3Q9Y2K2 1263 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 PCDHB7Q9Y5E2 793 aa14.37□□□□□ -0.11
CNN3-203ENST00000415017 LAMA2P24043 3122 aaKnown RBP14.37□□□□□ -0.11
CNN3-203ENST00000415017 N4BP1O75113 896 aaKnown RBP14.36□□□□□ -0.11
CNN3-203ENST00000415017 STAU1O95793 577 aaKnown RBP14.36□□□□□ -0.11
CNN3-203ENST00000415017 AMHP03971 560 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 DLATP10515 647 aaKnown RBP14.36□□□□□ -0.11
CNN3-203ENST00000415017 FGFR1P11362 822 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 TNNI1P19237 187 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 MAGEA10P43363 369 aaPredicted RBP14.36□□□□□ -0.11
CNN3-203ENST00000415017 MXI1P50539 228 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 UBASH3AP57075 661 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 GRIK3Q13003 919 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 TMEM132DQ14C87 1099 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 DCAF17Q5H9S7 520 aaPredicted RBP14.36□□□□□ -0.11
CNN3-203ENST00000415017 SMYD5Q6GMV2 418 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 GLB1LQ6UWU2 654 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 OTOP2Q7RTS6 562 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 PHOSPHO2Q8TCD6 241 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 CACTINQ8WUQ7 758 aaKnown RBP14.36□□□□□ -0.11
CNN3-203ENST00000415017 FAM84AQ96KN4 292 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 APOL6Q9BWW8 343 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 XPO4Q9C0E2 1151 aaKnown RBP14.36□□□□□ -0.11
CNN3-203ENST00000415017 VRTNQ9H8Y1 702 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 SLC38A7Q9NVC3 462 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 CXXC1Q9P0U4 656 aaPredicted RBP14.36□□□□□ -0.11
CNN3-203ENST00000415017 KANSL3Q9P2N6 904 aa14.36□□□□□ -0.11
CNN3-203ENST00000415017 UBQLN1Q9UMX0 589 aaKnown RBP14.36□□□□□ -0.11
CNN3-203ENST00000415017 RANBP2P49792 3224 aaKnown RBP14.36□□□□□ -0.11
CNN3-203ENST00000415017 PIRO00625 290 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms