RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 PLS3P13797 630 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 NTHL1P78549 312 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 STRN3Q13033 797 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 DHX8Q14562 1220 aaKnown RBP17.03■□□□□ 0.32
ACTB-202ENST00000414620 UPP1Q16831 310 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 PPM1LQ5SGD2 360 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 CYP26C1Q6V0L0 522 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 FLCNQ8NFG4 579 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 DDX27Q96GQ7 796 aaKnown RBP17.03■□□□□ 0.32
ACTB-202ENST00000414620 SNX27Q96L92 541 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 ZMAT2Q96NC0 199 aaKnown RBP17.03■□□□□ 0.32
ACTB-202ENST00000414620 ACAP3Q96P50 834 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 PRRX2Q99811 253 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 TIPINQ9BVW5 301 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 RHOBTB2Q9BYZ6 727 aa17.03■□□□□ 0.32
ACTB-202ENST00000414620 RBM19Q9Y4C8 960 aaKnown RBP17.03■□□□□ 0.32
ACTB-202ENST00000414620 PODXLO00592 558 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 MCF2P10911 925 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 FGFR3P22607 806 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 PROZP22891 400 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 OR1D2P34982 312 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 MATR3P43243 847 aaKnown RBP eCLIP17.02■□□□□ 0.32
ACTB-202ENST00000414620 GRIN1Q05586 938 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 ARL6IP4Q66PJ3 421 aaKnown RBP17.02■□□□□ 0.32
ACTB-202ENST00000414620 DCLRE1AQ6PJP8 1040 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 GRASPQ7Z6J2 395 aaPredicted RBP17.02■□□□□ 0.32
ACTB-202ENST00000414620 LRRC15Q8TF66 581 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 UROC1Q96N76 676 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 C17orf75Q9HAS0 396 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 IGSF9Q9P2J2 1179 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 FBXL21Q9UKT6 434 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 POLIQ9UNA4 740 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 CDY1Q9Y6F8 540 aa17.02■□□□□ 0.32
ACTB-202ENST00000414620 VPS37CA5D8V6 355 aaPredicted RBP17.01■□□□□ 0.31
ACTB-202ENST00000414620 MEFVO15553 781 aaPredicted RBP17.01■□□□□ 0.31
ACTB-202ENST00000414620 C1RP00736 705 aa17.01■□□□□ 0.31
ACTB-202ENST00000414620 CFHP08603 1231 aa17.01■□□□□ 0.31
ACTB-202ENST00000414620 MAPTP10636 758 aaKnown RBP17.01■□□□□ 0.31
ACTB-202ENST00000414620 NOLC1Q14978 699 aaKnown RBP eCLIP17.01■□□□□ 0.31
ACTB-202ENST00000414620 XKR4Q5GH76 650 aa17.01■□□□□ 0.31
ACTB-202ENST00000414620 CWF19L1Q69YN2 538 aaKnown RBP17.01■□□□□ 0.31
ACTB-202ENST00000414620 PDXDC1Q6P996 788 aa17.01■□□□□ 0.31
ACTB-202ENST00000414620 ALKAL1Q6UXT8 129 aa17.01■□□□□ 0.31
ACTB-202ENST00000414620 RSPO2Q6UXX9 243 aaPredicted RBP17.01■□□□□ 0.31
ACTB-202ENST00000414620 TMEM130Q8N3G9 435 aa17.01■□□□□ 0.31
ACTB-202ENST00000414620 TMEM161BQ8NDZ6 487 aa17.01■□□□□ 0.31
ACTB-202ENST00000414620 SLC7A14Q8TBB6 771 aa17.01■□□□□ 0.31
ACTB-202ENST00000414620 SPIRE2Q8WWL2 714 aa17.01■□□□□ 0.31
ACTB-202ENST00000414620 C18orf25Q96B23 403 aaPredicted RBP17.01■□□□□ 0.31
ACTB-202ENST00000414620 EPS15L1Q9UBC2 864 aa17.01■□□□□ 0.31
ACTB-202ENST00000414620 MTRRQ9UBK8 725 aa17.01■□□□□ 0.31
ACTB-202ENST00000414620 TCHHQ07283 1943 aa17.01■□□□□ 0.31
ACTB-202ENST00000414620 MIA3Q5JRA6 1907 aa17■□□□□ 0.31
ACTB-202ENST00000414620 H0Y858 1186 aa17■□□□□ 0.31
ACTB-202ENST00000414620 PAPLNO95428 1278 aa17■□□□□ 0.31
ACTB-202ENST00000414620 FSHRP23945 695 aa17■□□□□ 0.31
ACTB-202ENST00000414620 SMTNP53814 917 aa17■□□□□ 0.31
ACTB-202ENST00000414620 ARSHQ5FYA8 562 aa17■□□□□ 0.31
ACTB-202ENST00000414620 AXDND1Q5T1B0 1012 aaPredicted RBP17■□□□□ 0.31
ACTB-202ENST00000414620 ASTLQ6HA08 431 aaPredicted RBP17■□□□□ 0.31
ACTB-202ENST00000414620 GPBP1Q86WP2 473 aa17■□□□□ 0.31
ACTB-202ENST00000414620 RASSF8Q8NHQ8 419 aa17■□□□□ 0.31
ACTB-202ENST00000414620 BICD1Q96G01 975 aa17■□□□□ 0.31
ACTB-202ENST00000414620 CALML4Q96GE6 196 aa17■□□□□ 0.31
ACTB-202ENST00000414620 SLC38A7Q9NVC3 462 aa17■□□□□ 0.31
ACTB-202ENST00000414620 CNTN3Q9P232 1028 aa17■□□□□ 0.31
ACTB-202ENST00000414620 TRAPPC3O43617 180 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 TOM1L1O75674 476 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 CXCL8P10145 99 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 UBA7P41226 1012 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 SPAG1Q07617 926 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 RAB33AQ14088 237 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 MCM6Q14566 821 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 KARSQ15046 597 aaKnown RBP16.99■□□□□ 0.31
ACTB-202ENST00000414620 SF3A1Q15459 793 aaKnown RBP16.99■□□□□ 0.31
ACTB-202ENST00000414620 SIX5Q8N196 739 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 ATOH1Q92858 354 aaPredicted RBP16.99■□□□□ 0.31
ACTB-202ENST00000414620 AK8Q96MA6 479 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 REEP2Q9BRK0 252 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 NTPCRQ9BSD7 190 aaKnown RBP16.99■□□□□ 0.31
ACTB-202ENST00000414620 HAPLN2Q9GZV7 340 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 HCFC1R1Q9NWW0 138 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 TUBGCP4Q9UGJ1 667 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 CA14Q9ULX7 337 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 NUB1Q9Y5A7 615 aa16.99■□□□□ 0.31
ACTB-202ENST00000414620 TSC2P49815 1807 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 COL4A3Q01955 1670 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 K7ENM7 598 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 GALR2O43603 387 aaPredicted RBP16.98■□□□□ 0.31
ACTB-202ENST00000414620 FAM13AO94988 1023 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 HNRNPA1P09651 372 aaKnown RBP eCLIP16.98■□□□□ 0.31
ACTB-202ENST00000414620 LAMP2P13473 410 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 KCNE1P15382 129 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 NPR3P17342 541 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 PLCG1P19174 1290 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 NCKAP1LP55160 1127 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 ARPP19P56211 112 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 SLC10A6Q3KNW5 377 aa16.98■□□□□ 0.31
ACTB-202ENST00000414620 VARS2Q5ST30 1063 aaKnown RBP16.98■□□□□ 0.31
ACTB-202ENST00000414620 ANKS3Q6ZW76 656 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms