RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 SH3GL2Q99962 352 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 SYT17Q9BSW7 474 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 SMARCAL1Q9NZC9 954 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 EHD2Q9NZN4 543 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 MYH9P35579 1960 aaKnown RBP13.94□□□□□ -0.18
LITAF-203ENST00000413364 GOLGA8KD6RF30 607 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 CES2O00748 559 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 ARL2P36404 184 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 RFC5P40937 340 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 MOGSQ13724 837 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 SLFN11Q7Z7L1 901 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 KIRREL3Q8IZU9 778 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 ASAP3Q8TDY4 903 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 RUBCNQ92622 972 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 TAF4BQ92750 862 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 SEMA4DQ92854 862 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 TMEM143Q96AN5 459 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 MS4A14Q96JA4 679 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 EPAS1Q99814 870 aa13.94□□□□□ -0.18
LITAF-203ENST00000413364 PAPOLBQ9NRJ5 636 aaKnown RBP13.94□□□□□ -0.18
LITAF-203ENST00000413364 KIF4AO95239 1232 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 EPHX2P34913 555 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 NAMPTP43490 491 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 GPC3P51654 580 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 SKOR1P84550 965 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 FAM160B1Q5W0V3 765 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 MTHFD1LQ6UB35 978 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 SLC7A3Q8WY07 619 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 CCDC114Q96M63 670 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 MPHOSPH6Q99547 160 aaKnown RBP13.93□□□□□ -0.18
LITAF-203ENST00000413364 R3HDMLQ9H3Y0 253 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 EBF2Q9HAK2 575 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 KIAA1586Q9HCI6 787 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 TXNRD2Q9NNW7 524 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 NRBP2Q9NSY0 501 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 RBPJLQ9UBG7 517 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 PACSIN2Q9UNF0 486 aaPredicted RBP13.93□□□□□ -0.18
LITAF-203ENST00000413364 IBSPP21815 317 aaPredicted RBP13.93□□□□□ -0.18
LITAF-203ENST00000413364 GLRA2P23416 452 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 LIG4P49917 911 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 DNA2P51530 1060 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 MFAP3P55082 362 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 STRN3Q13033 797 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 E2F5Q15329 346 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 TARBP2Q15633 366 aaKnown RBP13.93□□□□□ -0.18
LITAF-203ENST00000413364 METTL7BQ6UX53 244 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 CRELD2Q6UXH1 353 aaPredicted RBP13.93□□□□□ -0.18
LITAF-203ENST00000413364 FASTKD5Q7L8L6 764 aaKnown RBP13.93□□□□□ -0.18
LITAF-203ENST00000413364 FAM228AQ86W67 206 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 TRIM42Q8IWZ5 723 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 FAM71AQ8IYT1 594 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 SYCE1Q8N0S2 351 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 CCHCR1Q8TD31 782 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 SLC20A1Q8WUM9 679 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 CTNNBL1Q8WYA6 563 aaPredicted RBP13.93□□□□□ -0.18
LITAF-203ENST00000413364 SEPT1Q8WYJ6 367 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 RFFLQ8WZ73 363 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 OPTNQ96CV9 577 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 KREMEN1Q96MU8 473 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 POP1Q99575 1024 aaKnown RBP13.93□□□□□ -0.18
LITAF-203ENST00000413364 FAM213AQ9BRX8 229 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 TOPORSQ9NS56 1045 aaPredicted RBP13.93□□□□□ -0.18
LITAF-203ENST00000413364 TPX2Q9ULW0 747 aaKnown RBP13.93□□□□□ -0.18
LITAF-203ENST00000413364 STYXL1Q9Y6J8 313 aa13.93□□□□□ -0.18
LITAF-203ENST00000413364 LRRC37A2A6NM11 1700 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 ZNF233A6NK53 670 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 SOCS7O14512 581 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 KIAA0391O15091 583 aaKnown RBP13.92□□□□□ -0.18
LITAF-203ENST00000413364 EXTL3O43909 919 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 GGPS1O95749 300 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 PIGRP01833 764 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 OSBPP22059 807 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 STAT5BP51692 787 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 RNF187Q5TA31 235 aaPredicted RBP13.92□□□□□ -0.18
LITAF-203ENST00000413364 FBXL13Q8NEE6 735 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 DEPTORQ8TB45 409 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 SHC3Q92529 594 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 KAT5Q92993 513 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 PBKQ96KB5 322 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 FGD4Q96M96 766 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 LRRC1Q9BTT6 524 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 RBM12Q9NTZ6 932 aaKnown RBP13.92□□□□□ -0.18
LITAF-203ENST00000413364 SEPT11Q9NVA2 429 aaKnown RBP13.92□□□□□ -0.18
LITAF-203ENST00000413364 STXBP5LQ9Y2K9 1186 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 MATR3P43243 847 aaKnown RBP eCLIP13.92□□□□□ -0.18
LITAF-203ENST00000413364 GLE1Q53GS7 698 aaKnown RBP13.92□□□□□ -0.18
LITAF-203ENST00000413364 ACBD5Q5T8D3 534 aaPredicted RBP13.92□□□□□ -0.18
LITAF-203ENST00000413364 CCNI2Q6ZMN8 369 aaPredicted RBP13.92□□□□□ -0.18
LITAF-203ENST00000413364 SV2AQ7L0J3 742 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 ARMC9Q7Z3E5 817 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 PALB2Q86YC2 1186 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 PPM1KQ8N3J5 372 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 HELQQ8TDG4 1101 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 NT5C1BQ96P26 610 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 TSC22D3Q99576 134 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 RAB20Q9NX57 234 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 TAS2R14Q9NYV8 317 aa13.92□□□□□ -0.18
LITAF-203ENST00000413364 SUCLA2Q9P2R7 463 aaPredicted RBP13.92□□□□□ -0.18
LITAF-203ENST00000413364 DNAJC25-GNG10A0A024R161 153 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms