RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 RAB34Q9BZG1 259 aa21.1■□□□□ 0.97
CPSF7-204ENST00000413232 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.1■□□□□ 0.978e-9■■■■■ 27.8
CPSF7-204ENST00000413232 COL4A3Q01955 1670 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 LAD1O00515 517 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 SLC16A4O15374 487 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 GFRA3O60609 400 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 PROZP22891 400 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 RAD51AP2Q09MP3 1159 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 ELAVL2Q12926 359 aaKnown RBP21.09■□□□□ 0.97
CPSF7-204ENST00000413232 RAB33AQ14088 237 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 ZNF568Q3ZCX4 644 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 MCTP1Q6DN14 999 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 TMEM130Q8N3G9 435 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 DDX27Q96GQ7 796 aaKnown RBP21.09■□□□□ 0.97
CPSF7-204ENST00000413232 PLIN2Q99541 437 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 IRF2BPLQ9H1B7 796 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 KMT5AQ9NQR1 393 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 MTRRQ9UBK8 725 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 WNT16Q9UBV4 365 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 STK24Q9Y6E0 443 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 NUMBLQ9Y6R0 609 aa21.09■□□□□ 0.97
CPSF7-204ENST00000413232 SRFP11831 508 aa21.08■□□□□ 0.97
CPSF7-204ENST00000413232 FSHRP23945 695 aa21.08■□□□□ 0.97
CPSF7-204ENST00000413232 ATP2C1P98194 919 aaPredicted RBP21.08■□□□□ 0.97
CPSF7-204ENST00000413232 DMP1Q13316 513 aaPredicted RBP21.08■□□□□ 0.97
CPSF7-204ENST00000413232 ZRSR1Q15695 479 aaKnown RBP21.08■□□□□ 0.97
CPSF7-204ENST00000413232 PPM1LQ5SGD2 360 aa21.08■□□□□ 0.97
CPSF7-204ENST00000413232 HYIQ5T013 277 aa21.08■□□□□ 0.97
CPSF7-204ENST00000413232 AXDND1Q5T1B0 1012 aaPredicted RBP21.08■□□□□ 0.97
CPSF7-204ENST00000413232 ASCL5Q7RTU5 278 aa21.08■□□□□ 0.97
CPSF7-204ENST00000413232 SLC7A14Q8TBB6 771 aa21.08■□□□□ 0.97
CPSF7-204ENST00000413232 GPR152Q8TDT2 470 aa21.08■□□□□ 0.97
CPSF7-204ENST00000413232 FGF14Q92915 247 aa21.08■□□□□ 0.97
CPSF7-204ENST00000413232 TMX3Q96JJ7 454 aa21.08■□□□□ 0.97
CPSF7-204ENST00000413232 MRPL4Q9BYD3 311 aaKnown RBP21.08■□□□□ 0.97
CPSF7-204ENST00000413232 HCFC1R1Q9NWW0 138 aa21.08■□□□□ 0.97
CPSF7-204ENST00000413232 CA14Q9ULX7 337 aa21.08■□□□□ 0.97
CPSF7-204ENST00000413232 CDY1Q9Y6F8 540 aa21.08■□□□□ 0.97
CPSF7-204ENST00000413232 PROB1E7EW31 1015 aa21.07■□□□□ 0.96
CPSF7-204ENST00000413232 HNRNPA1P09651 372 aaKnown RBP eCLIP21.07■□□□□ 0.96
CPSF7-204ENST00000413232 RABEP1Q15276 862 aa21.07■□□□□ 0.96
CPSF7-204ENST00000413232 SEZ6Q53EL9 994 aa21.07■□□□□ 0.96
CPSF7-204ENST00000413232 LIN9Q5TKA1 542 aa21.07■□□□□ 0.96
CPSF7-204ENST00000413232 POTEHQ6S545 545 aa21.07■□□□□ 0.96
CPSF7-204ENST00000413232 PARM1Q6UWI2 310 aa21.07■□□□□ 0.96
CPSF7-204ENST00000413232 ITFG1Q8TB96 612 aa21.07■□□□□ 0.96
CPSF7-204ENST00000413232 NXPE3Q969Y0 559 aa21.07■□□□□ 0.96
CPSF7-204ENST00000413232 C18orf25Q96B23 403 aaPredicted RBP21.07■□□□□ 0.96
CPSF7-204ENST00000413232 DRC1Q96MC2 740 aa21.07■□□□□ 0.96
CPSF7-204ENST00000413232 NTPCRQ9BSD7 190 aaKnown RBP21.07■□□□□ 0.96
CPSF7-204ENST00000413232 CCDC94Q9BW85 323 aaPredicted RBP21.07■□□□□ 0.96
CPSF7-204ENST00000413232 POLIQ9UNA4 740 aa21.07■□□□□ 0.96
CPSF7-204ENST00000413232 NPHP3-ACAD11A0A0J9YXS1 232 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 GUCY2CP25092 1073 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 GJB2P29033 226 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 HOXA9P31269 272 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 NBL1P41271 181 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 CCDC105Q8IYK2 499 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 LRRC15Q8TF66 581 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 FGF13Q92913 245 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 SNX27Q96L92 541 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 UROC1Q96N76 676 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 DNMT3BQ9UBC3 853 aaKnown RBP21.06■□□□□ 0.96
CPSF7-204ENST00000413232 CDH7Q9ULB5 785 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 RBM19Q9Y4C8 960 aaKnown RBP21.06■□□□□ 0.96
CPSF7-204ENST00000413232 ANK1P16157 1881 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 WDR87Q6ZQQ6 2873 aa21.06■□□□□ 0.96
CPSF7-204ENST00000413232 SPTBN4Q9H254 2564 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 VWA3AA6NCI4 1184 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 ST18O60284 1047 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 MCF2P10911 925 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 HARSP12081 509 aaKnown RBP21.05■□□□□ 0.96
CPSF7-204ENST00000413232 YARSP54577 528 aaKnown RBP21.05■□□□□ 0.96
CPSF7-204ENST00000413232 SLC12A3P55017 1021 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 RILPL1Q5EBL4 403 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 PDXDC1Q6P996 788 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 MPZL3Q6UWV2 235 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 SYT2Q8N9I0 419 aaPredicted RBP21.05■□□□□ 0.96
CPSF7-204ENST00000413232 DTWD2Q8NBA8 298 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 TMEM161BQ8NDZ6 487 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 ACAP3Q96P50 834 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 RTP3Q9BQQ7 232 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 TCHPQ9BT92 498 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 HAPLN2Q9GZV7 340 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 C17orf75Q9HAS0 396 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 BACE2Q9Y5Z0 518 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 MIA3Q5JRA6 1907 aa21.05■□□□□ 0.96
CPSF7-204ENST00000413232 PODXLO00592 558 aa21.04■□□□□ 0.96
CPSF7-204ENST00000413232 KCNE1P15382 129 aa21.04■□□□□ 0.96
CPSF7-204ENST00000413232 GPC5P78333 572 aa21.04■□□□□ 0.96
CPSF7-204ENST00000413232 CACNB1Q02641 598 aaPredicted RBP21.04■□□□□ 0.96
CPSF7-204ENST00000413232 UVSSAQ2YD98 709 aa21.04■□□□□ 0.96
CPSF7-204ENST00000413232 SLC10A6Q3KNW5 377 aa21.04■□□□□ 0.96
CPSF7-204ENST00000413232 ARSHQ5FYA8 562 aa21.04■□□□□ 0.96
CPSF7-204ENST00000413232 APBB1IPQ7Z5R6 666 aaPredicted RBP21.04■□□□□ 0.96
CPSF7-204ENST00000413232 FRMD5Q7Z6J6 570 aa21.04■□□□□ 0.96
CPSF7-204ENST00000413232 SPIRE2Q8WWL2 714 aa21.04■□□□□ 0.96
CPSF7-204ENST00000413232 TBC1D17Q9HA65 648 aa21.04■□□□□ 0.96
CPSF7-204ENST00000413232 TOPORSQ9NS56 1045 aaPredicted RBP21.04■□□□□ 0.96
CPSF7-204ENST00000413232 CNTN3Q9P232 1028 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms