RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 CCND3P30281 292 aaPredicted RBP9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 USP8P40818 1118 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 PHKA2P46019 1235 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 MFAP3P55082 362 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 GJA9P57773 515 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 MYL6P60660 151 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 NKX3-2P78367 333 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 RBM10P98175 930 aaKnown RBP9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 FMO1Q01740 532 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 GCNT1Q02742 428 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 CETN1Q12798 172 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 BMS1Q14692 1282 aaKnown RBP9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 FSCN1Q16658 493 aaKnown RBP9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 KIZQ2M2Z5 673 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 TAF3Q5VWG9 929 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 SRGAP1Q7Z6B7 1085 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 RPUSD2Q8IZ73 545 aaKnown RBP9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 COG1Q8WTW3 980 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 TMEM40Q8WWA1 233 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 DNAJB3Q8WWF6 145 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 ANKRD7Q92527 254 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 WNT8BQ93098 351 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 ARHGEF26Q96DR7 871 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 FAM212AQ96EL1 285 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 ERO1AQ96HE7 468 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 FNBP1Q96RU3 617 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 MMS19Q96T76 1030 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 OSBPL7Q9BZF2 842 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 XYLT2Q9H1B5 865 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 UPF3AQ9H1J1 476 aaKnown RBP9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 GOLPH3Q9H4A6 298 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 PRMT7Q9NVM4 692 aaPredicted RBP9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 PUF60Q9UHX1 559 aaKnown RBP9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 COG5Q9UP83 839 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 GRIN2DO15399 1336 aa9.3□□□□□ -0.92
HMGN1P34-201ENST00000413023 B4GALT4O60513 344 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 ZC3H11AO75152 810 aaKnown RBP eCLIP9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 PALMO75781 387 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 IPO7O95373 1038 aaKnown RBP9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 NFICP08651 508 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 CLTAP09496 248 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 H2AFZP0C0S5 128 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 CXCL8P10145 99 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 MCF2P10911 925 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 CYP2C9P11712 490 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 AKR1A1P14550 325 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 RFX1P22670 979 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 ANXA13P27216 316 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 TMOD1P28289 359 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 HTRA3P83110 453 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 NOGQ13253 232 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 BIRC3Q13489 604 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 NCOA4Q13772 614 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 ZNF568Q3ZCX4 644 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 C10orf76Q5T2E6 689 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 CCSAPQ6IQ19 270 aaPredicted RBP9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 CXCL17Q6UXB2 119 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 H2AFVQ71UI9 128 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 WDR49Q8IV35 697 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 RNF10Q8N5U6 811 aaKnown RBP9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 LRRC57Q8N9N7 239 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 EPS8L1Q8TE68 723 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 NLRP7Q8WX94 980 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 ZSWIM1Q9BR11 485 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 TSGA10Q9BZW7 698 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 SDCBP2Q9H190 292 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 ISCUQ9H1K1 167 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 RNF19AQ9NV58 838 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 SMARCAL1Q9NZC9 954 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 CHORDC1Q9UHD1 332 aaPredicted RBP9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 SIX4Q9UIU6 781 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 CNTN6Q9UQ52 1028 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 STXBP5LQ9Y2K9 1186 aa9.29□□□□□ -0.92
HMGN1P34-201ENST00000413023 ADAMTS4O75173 837 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 TACC1O75410 805 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 TRPA1O75762 1119 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 FTCDO95954 541 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 ALDH1A1P00352 501 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 ASS1P00966 412 aaKnown RBP9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 FTLP02792 175 aaPredicted RBP9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 DARSP14868 501 aaKnown RBP9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 ZSCAN20P17040 1043 aaPredicted RBP9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 SSTR3P32745 418 aaPredicted RBP9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 PIK3CAP42336 1068 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 CPT1AP50416 773 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 GUCY2FP51841 1108 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 TFAMQ00059 246 aaKnown RBP9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 SP3Q02447 781 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 CUL2Q13617 745 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 NBPF20Q3BBV1 942 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 GNASQ5JWF2 1037 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 UBXN11Q5T124 520 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 MEI1Q5TIA1 1274 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 MFSD14CQ5VZR4 134 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 JADE1Q6IE81 842 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 SLFN11Q7Z7L1 901 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 ZNF410Q86VK4 478 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 CPNE8Q86YQ8 564 aa9.28□□□□□ -0.92
HMGN1P34-201ENST00000413023 CREG2Q8IUH2 290 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms