RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 RNF168Q8IYW5 571 aaPredicted RBP14.34□□□□□ -0.11
SSB-203ENST00000413002 C3orf58Q8NDZ4 430 aa14.34□□□□□ -0.11
SSB-203ENST00000413002 ZSWIM2Q8NEG5 633 aa14.34□□□□□ -0.11
SSB-203ENST00000413002 FEZF2Q8TBJ5 459 aa14.34□□□□□ -0.11
SSB-203ENST00000413002 KCNN1Q92952 543 aa14.34□□□□□ -0.11
SSB-203ENST00000413002 MSLNLQ96KJ4 702 aa14.34□□□□□ -0.11
SSB-203ENST00000413002 KLHL5Q96PQ7 755 aa14.34□□□□□ -0.11
SSB-203ENST00000413002 CDCA3Q99618 268 aaPredicted RBP14.34□□□□□ -0.11
SSB-203ENST00000413002 MRPL17Q9NRX2 175 aaKnown RBP14.34□□□□□ -0.11
SSB-203ENST00000413002 SEL1LQ9UBV2 794 aa14.34□□□□□ -0.11
SSB-203ENST00000413002 TUBGCP4Q9UGJ1 667 aa14.34□□□□□ -0.11
SSB-203ENST00000413002 CD207Q9UJ71 328 aa14.34□□□□□ -0.11
SSB-203ENST00000413002 HCFC2Q9Y5Z7 792 aa14.34□□□□□ -0.11
SSB-203ENST00000413002 TCF20Q9UGU0 1960 aaKnown RBP14.34□□□□□ -0.11
SSB-203ENST00000413002 LACTBL1A8MY62 500 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 OGTO15294 1046 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 MBTPS2O43462 519 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 ACTN4O43707 911 aaKnown RBP14.33□□□□□ -0.12
SSB-203ENST00000413002 LILRB3O75022 631 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 B3GAT3O94766 335 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 URODP06132 367 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 CLTAP09496 248 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 CMA1P23946 247 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 KLRC2P26717 231 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 ADSSP30520 456 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 BRCC3P46736 316 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 GUCY2FP51841 1108 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 NDUFA8P51970 172 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 AMPD3Q01432 767 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 KCNC3Q14003 757 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 RTP2Q5QGT7 225 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 L1TD1Q5T7N2 865 aaKnown RBP14.33□□□□□ -0.12
SSB-203ENST00000413002 FAM171A1Q5VUB5 890 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 KIAA0319Q5VV43 1072 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 PRSS55Q6UWB4 352 aaPredicted RBP14.33□□□□□ -0.12
SSB-203ENST00000413002 CD300LGQ6UXG3 332 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 CEP57L1Q8IYX8 460 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 SYCP3Q8IZU3 236 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 C12orf76Q8N812 135 aaPredicted RBP14.33□□□□□ -0.12
SSB-203ENST00000413002 RIN2Q8WYP3 895 aaPredicted RBP14.33□□□□□ -0.12
SSB-203ENST00000413002 ACCSQ96QU6 501 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 C7orf25Q9BPX7 421 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 LRRC27Q9C0I9 530 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 SCAND2PQ9GZW5 306 aaPredicted RBP14.33□□□□□ -0.12
SSB-203ENST00000413002 GOLPH3LQ9H4A5 285 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 OLFML3Q9NRN5 406 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 CNTN3Q9P232 1028 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 IRAK3Q9Y616 596 aa14.33□□□□□ -0.12
SSB-203ENST00000413002 TDRD15B5MCY1 1934 aaKnown RBP14.33□□□□□ -0.12
SSB-203ENST00000413002 TTC26A0AVF1 554 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 TEX28O15482 410 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 WEE2P0C1S8 567 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 SLFN14P0C7P3 912 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 SPATA31D3P0C874 917 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 KCNE1P15382 129 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 SCP2P22307 547 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 NUCB2P80303 420 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 DSG1Q02413 1049 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 UPP1Q16831 310 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 USP41Q3LFD5 358 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 ANKRD54Q6NXT1 300 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 SYCE2Q6PIF2 218 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 SPATA31D4Q6ZUB0 917 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 FSIP1Q8NA03 581 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 NOC3LQ8WTT2 800 aaKnown RBP14.32□□□□□ -0.12
SSB-203ENST00000413002 POMGNT1Q8WZA1 660 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 SAAL1Q96ER3 474 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 KIF12Q96FN5 646 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 PAGE5Q96GU1 130 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 RPF1Q9H9Y2 349 aaKnown RBP14.32□□□□□ -0.12
SSB-203ENST00000413002 CD320Q9NPF0 282 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 CHST7Q9NS84 486 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 CPSF3Q9UKF6 684 aaKnown RBP14.32□□□□□ -0.12
SSB-203ENST00000413002 AGO2Q9UKV8 859 aaKnown RBP14.32□□□□□ -0.12
SSB-203ENST00000413002 HPSEQ9Y251 543 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 PCDHB13Q9Y5F0 798 aa14.32□□□□□ -0.12
SSB-203ENST00000413002 SF3B1O75533 1304 aaKnown RBP eCLIP14.32□□□□□ -0.121e-6■■■■■ 66.8
SSB-203ENST00000413002 GOLGA8IPA6NC78 632 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 GOLGA8JA6NMD2 632 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 PODXLO00592 558 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 DCLRE1AQ6PJP8 1040 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 PALB2Q86YC2 1186 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 SMRP1Q8NCR6 262 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 SLC22A17Q8WUG5 538 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 HVCN1Q96D96 273 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 EMILIN2Q9BXX0 1053 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 PCIF1Q9H4Z3 704 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 SLC39A2Q9NP94 309 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 SLC38A7Q9NVC3 462 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 EXOC7Q9UPT5 735 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 USP15Q9Y4E8 981 aaPredicted RBP14.31□□□□□ -0.12
SSB-203ENST00000413002 STYXL1Q9Y6J8 313 aa14.31□□□□□ -0.12
SSB-203ENST00000413002 NFICP08651 508 aa14.3□□□□□ -0.12
SSB-203ENST00000413002 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
SSB-203ENST00000413002 ABCD1P33897 745 aa14.3□□□□□ -0.12
SSB-203ENST00000413002 HOXD13P35453 343 aa14.3□□□□□ -0.12
SSB-203ENST00000413002 SYKP43405 635 aa14.3□□□□□ -0.12
SSB-203ENST00000413002 CLCN4P51793 760 aa14.3□□□□□ -0.12
SSB-203ENST00000413002 WNT7BP56706 349 aa14.3□□□□□ -0.12
SSB-203ENST00000413002 PPP2R3AQ06190 1150 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms