RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 YAF2Q8IY57 180 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ELMOD1Q8N336 334 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 LEMD2Q8NC56 503 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 GSTCDQ8NEC7 633 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZNF461Q8TAF7 563 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZSCAN18Q8TBC5 510 aaPredicted RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 FAM200AQ8TCP9 573 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 HASPINQ8TF76 798 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 TCP11Q8WWU5 503 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 RABGGTAQ92696 567 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 GATA6Q92908 595 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC5A5Q92911 643 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 SMARCD2Q92925 531 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 TMEM143Q96AN5 459 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 LENG9Q96B70 501 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC136Q96JN2 1154 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZC3H10Q96K80 434 aaKnown RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CEP170P1Q96L14 293 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZNF512Q96ME7 567 aaPredicted RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CORO1BQ9BR76 489 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 EDEM2Q9BV94 578 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 C22orf23Q9BZE7 217 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 GPR88Q9GZN0 384 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 UNC45AQ9H3U1 944 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 NXF3Q9H4D5 531 aaKnown RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLITRK6Q9H5Y7 841 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 DHX33Q9H6R0 707 aaKnown RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 MINDY3Q9H8M7 445 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 RBM12Q9NTZ6 932 aaKnown RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 HCFC1R1Q9NWW0 138 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 KLK14Q9P0G3 267 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ANKFY1Q9P2R3 1169 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 MTRRQ9UBK8 725 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 WASF3Q9UPY6 502 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 NEUROG3Q9Y4Z2 214 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 RBM8AQ9Y5S9 174 aaKnown RBP2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 BACE2Q9Y5Z0 518 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZFHX4Q86UP3 3567 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZZEF1O43149 2961 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 CNTNAP5Q8WYK1 1306 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 DOCK6Q96HP0 2047 aa2.63□□□□□ -1.99
RNU4-53P-201ENST00000410828 DENND4AQ7Z401 1863 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 DOCK5Q9H7D0 1870 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ASCC3Q8N3C0 2202 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZMYM2Q9UBW7 1377 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 LOXHD1Q8IVV2 1947 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 A0A1B0GUA9 196 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 BCLAF3A2AJT9 711 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 WDR27A2RRH5 827 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 MYBPHLA2RUH7 354 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC38A8A6NNN8 435 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 GOLGA8AA7E2F4 631 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 GOLGA8BA8MQT2 603 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 HEPACAM2A8MVW5 462 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 SPECC1L-ADORA2AF8WAN1 911 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 H0Y626 953 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TMEM189-UBE2V1I3L0A0 370 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ARNTLO00327 626 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 DPYSL4O14531 572 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC27A2O14975 620 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 KHNYNO15037 678 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ADAMTS3O15072 1205 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 PRPF3O43395 683 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 HYAL3O43820 417 aaPredicted RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 EXTL3O43909 919 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 RHOBTB1O94844 696 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ABLIM3O94929 683 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TRIM16O95361 564 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 SEC24BO95487 1268 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 NPTXRO95502 500 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 CAVIN2O95810 425 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TOP3BO95985 862 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 P4HBP07237 508 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 MYL4P12829 197 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 GSPT1P15170 499 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ATF2P15336 505 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ARF4P18085 180 aaPredicted RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 YWHABP31946 246 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 GBP1P32455 592 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 CTHP32929 405 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 PXNP49023 591 aaPredicted RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 RCAN1P53805 252 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ARPP19P56211 112 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 NLRP5P59047 1200 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 PLCB2Q00722 1185 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ROR1Q01973 937 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 AKAP17AQ02040 695 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 CREB5Q02930 508 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 MBTD1Q05BQ5 628 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 FCHO2Q0JRZ9 810 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 GRSF1Q12849 480 aaKnown RBP eCLIP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCINQ13939 588 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 EMC2Q15006 297 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 KARSQ15046 597 aaKnown RBP2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 PON2Q15165 354 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 AMHR2Q16671 573 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 TMEM132AQ24JP5 1023 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 PLK5Q496M5 336 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 ARHGAP29Q52LW3 1261 aa2.62□□□□□ -1.99
RNU4-53P-201ENST00000410828 SOWAHCQ53LP3 525 aaPredicted RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms