RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 RBAKQ9NYW8 714 aaPredicted RBP14.57□□□□□ -0.08
LIMS1-205ENST00000410093 NOC2LQ9Y3T9 749 aaKnown RBP14.57□□□□□ -0.08
LIMS1-205ENST00000410093 CCDC66A2RUB6 948 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 A6NNZ2 444 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 KRIT1O00522 736 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 CLDN3O15551 220 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 CYP26A1O43174 497 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 HBP1O60381 514 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 SGPL1O95470 568 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 ABCB4P21439 1286 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 SOX10P56693 466 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 FMO1Q01740 532 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 MOGSQ13724 837 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 TUBB8Q3ZCM7 444 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 ZNF467Q7Z7K2 595 aaPredicted RBP14.56□□□□□ -0.08
LIMS1-205ENST00000410093 WDR49Q8IV35 697 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 DHX37Q8IY37 1157 aaKnown RBP14.56□□□□□ -0.08
LIMS1-205ENST00000410093 ZSWIM2Q8NEG5 633 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 SLC20A1Q8WUM9 679 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 GLG1Q92896 1179 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 KRT12Q99456 494 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 NFKBIZQ9BYH8 718 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 CNTN6Q9UQ52 1028 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 TRIM17Q9Y577 477 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 GOLGA6BA6NDN3 693 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 BHMG1C9JSJ3 638 aaPredicted RBP14.56□□□□□ -0.08
LIMS1-205ENST00000410093 DDX3YO15523 660 aaKnown RBP14.56□□□□□ -0.08
LIMS1-205ENST00000410093 STRNO43815 780 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 CTNNA2P26232 953 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 PIK3CAP42336 1068 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 GCLCP48506 637 aaPredicted RBP14.56□□□□□ -0.08
LIMS1-205ENST00000410093 ERVK-9P63128 1117 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 LAMC2Q13753 1193 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 CAPSQ13938 189 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 MAPK6Q16659 721 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 KYAT1Q16773 422 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 CLEC16AQ2KHT3 1053 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 GPAT2Q6NUI2 795 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 CCDC62Q6P9F0 684 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 BRSK2Q8IWQ3 736 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 DDX1Q92499 740 aaKnown RBP14.56□□□□□ -0.08
LIMS1-205ENST00000410093 RAB17Q9H0T7 212 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 OSGEPQ9NPF4 335 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 PACSIN2Q9UNF0 486 aaPredicted RBP14.56□□□□□ -0.08
LIMS1-205ENST00000410093 ALG6Q9Y672 507 aa14.56□□□□□ -0.08
LIMS1-205ENST00000410093 PLXNA1Q9UIW2 1896 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 BTBD19C9JJ37 291 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 GOLGA8KD6RF30 607 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 HSF2BPO75031 334 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 HLA-DRAP01903 254 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 SLC1A1P43005 524 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 DHX34Q14147 1143 aaKnown RBP14.55□□□□□ -0.08
LIMS1-205ENST00000410093 ZNF484Q5JVG2 852 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 SPDYCQ5MJ68 293 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 FBXO46Q6PJ61 603 aaPredicted RBP14.55□□□□□ -0.08
LIMS1-205ENST00000410093 CRELD2Q6UXH1 353 aaPredicted RBP14.55□□□□□ -0.08
LIMS1-205ENST00000410093 SND1Q7KZF4 910 aaKnown RBP eCLIP14.55□□□□□ -0.08
LIMS1-205ENST00000410093 SLC47A2Q86VL8 602 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 C1orf131Q8NDD1 294 aaKnown RBP14.55□□□□□ -0.08
LIMS1-205ENST00000410093 MAIP1Q8WWC4 291 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 EMID1Q96A84 441 aaPredicted RBP14.55□□□□□ -0.08
LIMS1-205ENST00000410093 ARHGEF26Q96DR7 871 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 RUFY1Q96T51 708 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 POP1Q99575 1024 aaKnown RBP14.55□□□□□ -0.08
LIMS1-205ENST00000410093 FAM129AQ9BZQ8 928 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 CCDC113Q9H0I3 377 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 EPB41L5Q9HCM4 733 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 VTA1Q9NP79 307 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 FAM114A2Q9NRY5 505 aa14.55□□□□□ -0.08
LIMS1-205ENST00000410093 ZSWIM8A7E2V4 1837 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 COL1A2P08123 1366 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 FAM187AA6NFU0 413 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 OGTO15294 1046 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 POLR3GO15318 223 aaPredicted RBP14.54□□□□□ -0.08
LIMS1-205ENST00000410093 MAGEB2O15479 319 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 SART1O43290 800 aaKnown RBP14.54□□□□□ -0.08
LIMS1-205ENST00000410093 MSCO60682 206 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 NLRP11P59045 1033 aaKnown RBP14.54□□□□□ -0.08
LIMS1-205ENST00000410093 PTENP60484 403 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 YWHAEP62258 255 aaKnown RBP14.54□□□□□ -0.08
LIMS1-205ENST00000410093 GUCY2DQ02846 1103 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 MCL1Q07820 350 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 PPFIA1Q13136 1202 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 BIRC3Q13489 604 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 CUL2Q13617 745 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 LY6KQ17RY6 165 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 ANKRD23Q86SG2 305 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 GPRC5AQ8NFJ5 357 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 HDAC7Q8WUI4 952 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 PRPF31Q8WWY3 499 aaKnown RBP14.54□□□□□ -0.08
LIMS1-205ENST00000410093 SEC14L1Q92503 715 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 ZNF516Q92618 1163 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 LRRC45Q96CN5 670 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 FGD4Q96M96 766 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 SPATA33Q96N06 139 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 PCDHB18PQ96TA0 734 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 TARS2Q9BW92 718 aaKnown RBP14.54□□□□□ -0.08
LIMS1-205ENST00000410093 EFCC1Q9HA90 598 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 SUGCTQ9HAC7 445 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 TAS2R14Q9NYV8 317 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms