RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 TIMMDC1Q9NPL8 285 aa5.52□□□□□ -1.53
R3HDM1-204ENST00000410054 STRN4Q9NRL3 753 aa5.52□□□□□ -1.53
R3HDM1-204ENST00000410054 SLC39A1Q9NY26 324 aa5.52□□□□□ -1.53
R3HDM1-204ENST00000410054 STOML2Q9UJZ1 356 aa5.52□□□□□ -1.53
R3HDM1-204ENST00000410054 ATP8B3O60423 1300 aa5.52□□□□□ -1.53
R3HDM1-204ENST00000410054 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 BTBD19C9JJ37 291 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 CFAP99D6REC4 459 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 TOR1BO14657 336 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 ARHGAP6O43182 974 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 CCNKO75909 580 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 SRGAP2CP0DJJ0 459 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 FGFR1P11362 822 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 VARSP26640 1264 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 HSD17B2P37059 387 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 NT5C2P49902 561 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 EPHB1P54762 984 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 RHAGQ02094 409 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 NIPAL4Q0D2K0 466 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 THOC5Q13769 683 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 MXD4Q14582 209 aaPredicted RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 RAB3GAP1Q15042 981 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 ARL13BQ3SXY8 428 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 FUT11Q495W5 492 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 SPATS1Q496A3 300 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 PDCD4Q53EL6 469 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 CYB5D1Q6P9G0 228 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 ULK3Q6PHR2 472 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 SESTD1Q86VW0 696 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 DEPTORQ8TB45 409 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 ANKRD7Q92527 254 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 PIMREGQ9BSJ6 248 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 VPS33BQ9H267 617 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 CCDC59Q9P031 241 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 HBS1LQ9Y450 684 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 SAMM50Q9Y512 469 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 TYW5A2RUC4 315 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 EIF4E1BA6NMX2 242 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 TCP11X1B4DZS4 312 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 MT-CO1P00395 513 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 P4HBP07237 508 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 FAM228BP0C875 321 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 MX1P20591 662 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 ATP4AP20648 1035 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 F8A1P23610 371 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 ALDH4A1P30038 563 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 EIF4A3P38919 411 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 IARSP41252 1262 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 PHKA1P46020 1223 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 INPP1P49441 399 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 DIO1P49895 249 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 PPP4CP60510 307 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 APBA1Q02410 837 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 SSRP1Q08945 709 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 NCF4Q15080 339 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 TAF5Q15542 800 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 CARTPTQ16568 116 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 SWI5Q1ZZU3 235 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 LRIT3Q3SXY7 679 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 IFI44LQ53G44 452 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 TAF1BQ53T94 588 aaPredicted RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 ATAD3CQ5T2N8 411 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 METTL11BQ5VVY1 283 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 SPOPLQ6IQ16 392 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 ARHGAP36Q6ZRI8 547 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 RHOUQ7L0Q8 258 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 C16orf59Q7L2K0 433 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 NLRP13Q86W25 1043 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 TRIM59Q8IWR1 403 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 ANKFN1Q8N957 763 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 IGSF22Q8N9C0 903 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 SMYD1Q8NB12 490 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 BBS1Q8NFJ9 593 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 SLC26A7Q8TE54 656 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 PPP1R13LQ8WUF5 828 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 STARD8Q92502 1023 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 MAGED4Q96JG8 741 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 ASB2Q96Q27 587 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 BBS2Q9BXC9 721 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 IFT22Q9H7X7 185 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 ZCCHC17Q9NP64 241 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 CASS4Q9NQ75 786 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 AVENQ9NQS1 362 aaPredicted RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 HSPBP1Q9NZL4 362 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 TXNDC16Q9P2K2 825 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 HMGXB4Q9UGU5 601 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 LAMP5Q9UJQ1 280 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 IGF1RP08069 1367 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 BIVM-ERCC5R4GMW8 1640 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 PRR23AA6NEV1 266 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 TK2O00142 265 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 VAMP4O75379 141 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 SLC4A2P04920 1241 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 KCNA3P22001 575 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 MAT2AP31153 395 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 RNF4P78317 190 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 ZSCAN23Q3MJ62 389 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 EMC10Q5UCC4 262 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 PPP2R2DQ66LE6 453 aa5.51□□□□□ -1.53
R3HDM1-204ENST00000410054 RSBN1LQ6PCB5 846 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms