RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 TCP1P17987 556 aaKnown RBP15.4■□□□□ 0.06
MINDY4-202ENST00000409881 PAFAH1B1P43034 410 aa15.4■□□□□ 0.06
MINDY4-202ENST00000409881 CAPSQ13938 189 aa15.4■□□□□ 0.06
MINDY4-202ENST00000409881 MXD4Q14582 209 aaPredicted RBP15.4■□□□□ 0.06
MINDY4-202ENST00000409881 PPP2R5AQ15172 486 aa15.4■□□□□ 0.06
MINDY4-202ENST00000409881 SESTD1Q86VW0 696 aa15.4■□□□□ 0.06
MINDY4-202ENST00000409881 CEP57Q86XR8 500 aa15.4■□□□□ 0.06
MINDY4-202ENST00000409881 KIAA0319LQ8IZA0 1049 aa15.4■□□□□ 0.06
MINDY4-202ENST00000409881 PIK3R5Q8WYR1 880 aa15.4■□□□□ 0.06
MINDY4-202ENST00000409881 NLRP4Q96MN2 994 aa15.4■□□□□ 0.06
MINDY4-202ENST00000409881 FIZ1Q96SL8 496 aa15.4■□□□□ 0.06
MINDY4-202ENST00000409881 EPB41L5Q9HCM4 733 aa15.4■□□□□ 0.06
MINDY4-202ENST00000409881 PPANQ9NQ55 473 aaKnown RBP15.4■□□□□ 0.06
MINDY4-202ENST00000409881 EVPLQ92817 2033 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 MDH1P40925 334 aaKnown RBP15.39■□□□□ 0.05
MINDY4-202ENST00000409881 GUCY2DQ02846 1103 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 ZC2HC1CQ53FD0 456 aaPredicted RBP15.39■□□□□ 0.05
MINDY4-202ENST00000409881 DEPTORQ8TB45 409 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 SPIRE2Q8WWL2 714 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 NUP58Q9BVL2 599 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 SENP6Q9GZR1 1112 aaPredicted RBP15.39■□□□□ 0.05
MINDY4-202ENST00000409881 NOD1Q9Y239 953 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 SMIM35A0A1B0GVV1 85 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 PRLRP16471 622 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 TNFRSF8P28908 595 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 HPDP32754 393 aaPredicted RBP15.39■□□□□ 0.05
MINDY4-202ENST00000409881 NAMPTP43490 491 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 DNA2P51530 1060 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 CDR1P51861 262 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 TMEM62Q0P6H9 643 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 ZNF720Q7Z2F6 126 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 NELFCDQ8IXH7 590 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 MYOCDQ8IZQ8 938 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 CSGALNACT2Q8N6G5 542 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 RNF149Q8NC42 400 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 DNAJB3Q8WWF6 145 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 MIEF2Q96C03 454 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 CCDC114Q96M63 670 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 SCLT1Q96NL6 688 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 TRMT13Q9NUP7 481 aaKnown RBP15.39■□□□□ 0.05
MINDY4-202ENST00000409881 ADGRA3Q8IWK6 1321 aa15.39■□□□□ 0.05
MINDY4-202ENST00000409881 HEXIM1O94992 359 aaKnown RBP15.38■□□□□ 0.05
MINDY4-202ENST00000409881 FAM107AO95990 144 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 NCKAP1LP55160 1127 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 TFDP1Q14186 410 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 SPRED3Q2MJR0 410 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 TTI2Q6NXR4 508 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 STXBP4Q6ZWJ1 553 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 HAUS6Q7Z4H7 955 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 IFT20Q8IY31 132 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 DIS3LQ8TF46 1054 aaKnown RBP15.38■□□□□ 0.05
MINDY4-202ENST00000409881 SCFD1Q8WVM8 642 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 TACO1Q9BSH4 297 aaKnown RBP15.38■□□□□ 0.05
MINDY4-202ENST00000409881 ARHGAP20Q9P2F6 1191 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 SALL4Q9UJQ4 1053 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 TRIP12Q14669 1992 aaPredicted RBP15.38■□□□□ 0.05
MINDY4-202ENST00000409881 PSMA7O14818 248 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 MTIF2P46199 727 aaKnown RBP15.38■□□□□ 0.05
MINDY4-202ENST00000409881 MNX1P50219 401 aaPredicted RBP15.38■□□□□ 0.05
MINDY4-202ENST00000409881 PTPN11Q06124 597 aaPredicted RBP15.38■□□□□ 0.05
MINDY4-202ENST00000409881 TRADDQ15628 312 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 TAF2Q6P1X5 1199 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 ATP6V1G3Q96LB4 118 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 ALS2CR12Q96Q35 445 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 DUSP9Q99956 384 aaKnown RBP15.38■□□□□ 0.05
MINDY4-202ENST00000409881 GINS2Q9Y248 185 aa15.38■□□□□ 0.05
MINDY4-202ENST00000409881 KIAA0100Q14667 2235 aaKnown RBP15.37■□□□□ 0.05
MINDY4-202ENST00000409881 DENND3A2RUS2 1198 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 ARVCFO00192 962 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 ASAP2O43150 1006 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 MAPTP10636 758 aaKnown RBP15.37■□□□□ 0.05
MINDY4-202ENST00000409881 KIF11P52732 1056 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 ATN1P54259 1190 aaPredicted RBP15.37■□□□□ 0.05
MINDY4-202ENST00000409881 WLSQ5T9L3 541 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 C6orf89Q6UWU4 347 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 CCDC121Q6ZUS5 278 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 EPM2AIP1Q7L775 607 aaPredicted RBP15.37■□□□□ 0.05
MINDY4-202ENST00000409881 MAATS1Q7Z4T9 603 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 SLC17A8Q8NDX2 589 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 TMEM161BQ8NDZ6 487 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 NLRP7Q8WX94 980 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 CYFIP2Q96F07 1278 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 CNOT6LQ96LI5 555 aaKnown RBP15.37■□□□□ 0.05
MINDY4-202ENST00000409881 KCNG1Q9UIX4 513 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.37■□□□□ 0.05
MINDY4-202ENST00000409881 PCDHB13Q9Y5F0 798 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 CCDC189A1A4V9 331 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 BUB1O43683 1085 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 EIF4A3P38919 411 aaKnown RBP15.37■□□□□ 0.05
MINDY4-202ENST00000409881 NLRP11P59045 1033 aaKnown RBP15.37■□□□□ 0.05
MINDY4-202ENST00000409881 KCNA1Q09470 495 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 SERINC5Q86VE9 423 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 GUF1Q8N442 669 aaKnown RBP15.37■□□□□ 0.05
MINDY4-202ENST00000409881 SLC43A3Q8NBI5 491 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 NTPCRQ9BSD7 190 aaKnown RBP15.37■□□□□ 0.05
MINDY4-202ENST00000409881 NOC4LQ9BVI4 516 aaKnown RBP15.37■□□□□ 0.05
MINDY4-202ENST00000409881 TLR10Q9BXR5 811 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 TRPV6Q9H1D0 765 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 GDF3Q9NR23 364 aa15.37■□□□□ 0.05
MINDY4-202ENST00000409881 GPC3P51654 580 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms