RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 RPUSD2Q8IZ73 545 aaKnown RBP5.46□□□□□ -1.54
PMS1-203ENST00000409593 PROKR1Q8TCW9 393 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 SLC13A1Q9BZW2 595 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 PCED1AQ9H1Q7 454 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 AKIP1Q9NQ31 210 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 SLC23A1Q9UHI7 598 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 FZD1Q9UP38 647 aa5.46□□□□□ -1.54
PMS1-203ENST00000409593 SNUPNO95149 360 aaKnown RBP5.45□□□□□ -1.54
PMS1-203ENST00000409593 ABHD16AO95870 558 aa5.45□□□□□ -1.54
PMS1-203ENST00000409593 WASP42768 502 aa5.45□□□□□ -1.54
PMS1-203ENST00000409593 CDC42EP1Q00587 391 aa5.45□□□□□ -1.54
PMS1-203ENST00000409593 IL10RAQ13651 578 aa5.45□□□□□ -1.54
PMS1-203ENST00000409593 ATP2B3Q16720 1220 aa5.45□□□□□ -1.54
PMS1-203ENST00000409593 FAM102AQ5T9C2 384 aaPredicted RBP5.45□□□□□ -1.54
PMS1-203ENST00000409593 SEM1Q6ZVN7 128 aa5.45□□□□□ -1.54
PMS1-203ENST00000409593 LARP4BQ92615 738 aaKnown RBP5.45□□□□□ -1.54
PMS1-203ENST00000409593 KAT5Q92993 513 aa5.45□□□□□ -1.54
PMS1-203ENST00000409593 SORCS2Q96PQ0 1159 aa5.45□□□□□ -1.54
PMS1-203ENST00000409593 NEU1Q99519 415 aa5.45□□□□□ -1.54
PMS1-203ENST00000409593 REXO4Q9GZR2 422 aaKnown RBP5.45□□□□□ -1.54
PMS1-203ENST00000409593 FBXO34Q9NWN3 711 aa5.45□□□□□ -1.54
PMS1-203ENST00000409593 SERPINB13Q9UIV8 391 aa5.45□□□□□ -1.54
PMS1-203ENST00000409593 ATP11BQ9Y2G3 1177 aa5.45□□□□□ -1.54
PMS1-203ENST00000409593 LOC105371045A0A1W2PR82 267 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 TCRBV7S2A1N4TA0A589 114 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 PPFIA4O75335 1185 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 NDUFA10O95299 355 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 ALAS1P13196 640 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 NCLP19338 710 aaKnown RBP5.44□□□□□ -1.54
PMS1-203ENST00000409593 SLC6A2P23975 617 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 IGBP1P78318 339 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 ATP8B2P98198 1209 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 TARDBPQ13148 414 aaKnown RBP eCLIP5.44□□□□□ -1.54
PMS1-203ENST00000409593 UBXN2BQ14CS0 331 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 TSHZ3Q63HK5 1081 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 MRGPREQ86SM8 312 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 MIER2Q8N344 545 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 OR56A1Q8NGH5 318 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 COA7Q96BR5 231 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 MLST8Q9BVC4 326 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 C11orf54Q9H0W9 315 aaPredicted RBP5.44□□□□□ -1.54
PMS1-203ENST00000409593 SPEF1Q9Y4P9 236 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 IPPQ9Y573 584 aa5.44□□□□□ -1.54
PMS1-203ENST00000409593 LPXNO60711 386 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 EDNRBP24530 442 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 ZFP36P26651 326 aaKnown RBP5.43□□□□□ -1.54
PMS1-203ENST00000409593 RECQLP46063 649 aaPredicted RBP5.43□□□□□ -1.54
PMS1-203ENST00000409593 ADKP55263 362 aaKnown RBP5.43□□□□□ -1.54
PMS1-203ENST00000409593 EXOSC10Q01780 885 aaKnown RBP5.43□□□□□ -1.54
PMS1-203ENST00000409593 LY6G5CQ5SRR4 150 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 AGAP9Q5VTM2 703 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 PPP4R3AQ6IN85 833 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 CPEB3Q8NE35 698 aaKnown RBP5.43□□□□□ -1.54
PMS1-203ENST00000409593 LENG9Q96B70 501 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 ZSWIM1Q9BR11 485 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 MRIQ9BWK5 157 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 MAP3K2Q9Y2U5 619 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 LUC7L2Q9Y383 392 aaKnown RBP5.43□□□□□ -1.54
PMS1-203ENST00000409593 GAGE12BA1L429 117 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 CDHR4A6H8M9 788 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 GAGE12HA6NDE8 117 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 HMGA2P52926 109 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 CTXN1P60606 82 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 PTPAQ15257 358 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 METRNLQ641Q3 311 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 GADL1Q6ZQY3 521 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 ZNF627Q7L945 461 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 RHOT2Q8IXI1 618 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 MYEOVQ96EZ4 313 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.43□□□□□ -1.54
PMS1-203ENST00000409593 FPGT-TNNI3KV9GXZ4 949 aa5.43□□□□□ -1.54
PMS1-203ENST00000409593 CENPVL1A0A0U1RR11 272 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 UNC119BA6NIH7 251 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 SGTAO43765 313 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 ZRANB2O95218 330 aaKnown RBP eCLIP5.42□□□□□ -1.54
PMS1-203ENST00000409593 HLA-DOAP06340 250 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 NEK2P51955 445 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 MXRA7P84157 204 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 BEAN1Q3B7T3 259 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 RHOUQ7L0Q8 258 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 MAPKAPK5Q8IW41 473 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 DCBLD1Q8N8Z6 715 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 IFI44Q8TCB0 444 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 CHMP4CQ96CF2 233 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 CLPTM1LQ96KA5 538 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 CEP89Q96ST8 783 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 GSTO2Q9H4Y5 243 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 KLHL11Q9NVR0 708 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 ANKFY1Q9P2R3 1169 aa5.42□□□□□ -1.54
PMS1-203ENST00000409593 GRM6O15303 877 aa5.41□□□□□ -1.54
PMS1-203ENST00000409593 IL33O95760 270 aa5.41□□□□□ -1.54
PMS1-203ENST00000409593 RPLP2P05387 115 aaKnown RBP5.41□□□□□ -1.54
PMS1-203ENST00000409593 DDX6P26196 483 aaKnown RBP eCLIP5.41□□□□□ -1.54
PMS1-203ENST00000409593 ZNF280AP59817 542 aaPredicted RBP5.41□□□□□ -1.54
PMS1-203ENST00000409593 FITM2Q8N6M3 262 aa5.41□□□□□ -1.54
PMS1-203ENST00000409593 RNPEPQ9H4A4 650 aa5.41□□□□□ -1.54
PMS1-203ENST00000409593 AASDHPPTQ9NRN7 309 aa5.41□□□□□ -1.54
PMS1-203ENST00000409593 SHROOM4Q9ULL8 1493 aa5.41□□□□□ -1.54
PMS1-203ENST00000409593 AATKQ6ZMQ8 1374 aa5.41□□□□□ -1.54
PMS1-203ENST00000409593 HAUS5O94927 633 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms