RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 TRAK2O60296 914 aa21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 TBCAO75347 108 aaKnown RBP21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 PAPLNO95428 1278 aa21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 SPATA31D3P0C874 917 aa21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 SOX4Q06945 474 aaPredicted RBP21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 CD300LGQ6UXG3 332 aa21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 TRIM67Q6ZTA4 783 aa21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 SPATA31D4Q6ZUB0 917 aa21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 ZDHHC14Q8IZN3 488 aa21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 BICD1Q96G01 975 aa21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 CLSTN3Q9BQT9 956 aa21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 GOLGA2P5Q9HBQ8 144 aa21.44■■□□□ 1.02
TSPAN4-209ENST00000409543 CITO14578 2027 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 K7ENM7 598 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 MEFVO15553 781 aaPredicted RBP21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 TRAPPC3O43617 180 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 PIGRP01833 764 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 FGFR3P22607 806 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 ABCD1P33897 745 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 TXLNAP40222 546 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 PSMD5Q16401 504 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 SLC10A6Q3KNW5 377 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 RRAGBQ5VZM2 374 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 GLYCTKQ8IVS8 523 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 PLCD3Q8N3E9 789 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 TDRD5Q8NAT2 981 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 HAPLN2Q9GZV7 340 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 ZHX3Q9H4I2 956 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 HCN4Q9Y3Q4 1203 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 GTF3C3Q9Y5Q9 886 aa21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 MTCL1Q9Y4B5 1905 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-209ENST00000409543 TECTAO75443 2155 aa21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 IGFBP6P24592 240 aaPredicted RBP21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 MATR3P43243 847 aaKnown RBP eCLIP21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 NASPP49321 788 aaPredicted RBP21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 LIG4P49917 911 aa21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 CCDC149Q6ZUS6 474 aa21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 DENND4AQ7Z401 1863 aa21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 HSCBQ8IWL3 235 aa21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 KRI1Q8N9T8 703 aaKnown RBP21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 KREMEN2Q8NCW0 462 aa21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 C3orf58Q8NDZ4 430 aa21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 FIZ1Q96SL8 496 aa21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 PLEKHA5Q9HAU0 1116 aa21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 ZDHHC7Q9NXF8 308 aa21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 ARIH1Q9Y4X5 557 aaPredicted RBP21.42■■□□□ 1.02
TSPAN4-209ENST00000409543 PODXLO00592 558 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 RFPL2O75678 378 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 CLTAP09496 248 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 MYBP10242 640 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 PDIA4P13667 645 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 RPL9P32969 192 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 GTF2BQ00403 316 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 KYAT1Q16773 422 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 SEZ6Q53EL9 994 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 HFE2Q6ZVN8 426 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 OTOP3Q7RTS5 596 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 BMP8AQ7Z5Y6 402 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 ACSF2Q96CM8 615 aaPredicted RBP21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 ST6GALNAC4Q9H4F1 302 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 C2orf16Q68DN1 1984 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 VWA8A3KMH1 1905 aa21.41■■□□□ 1.02
TSPAN4-209ENST00000409543 TMEM221A6NGB7 291 aa21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 M0R296 226 aa21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 HNRNPDLO14979 420 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 SIGLEC14Q08ET2 396 aa21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 CCDC73Q6ZRK6 1079 aa21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 SV2BQ7L1I2 683 aa21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 SMG7Q92540 1137 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 C18orf25Q96B23 403 aaPredicted RBP21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 ZNF707Q96C28 371 aaPredicted RBP21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 MFSD14AQ96MC6 490 aa21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 WDR6Q9NNW5 1121 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 MTRRQ9UBK8 725 aa21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 FBXW11Q9UKB1 542 aa21.4■■□□□ 1.02
TSPAN4-209ENST00000409543 ZMYND10O75800 440 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 CXCL8P10145 99 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 NMT1P30419 496 aaKnown RBP21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 BRCC3P46736 316 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 RAB33AQ14088 237 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 STK38Q15208 465 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 ANKS3Q6ZW76 656 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 DYMQ7RTS9 669 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 MAP4K3Q8IVH8 894 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 LINC00301Q8NCQ3 95 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 DDX12PQ92771 950 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 ZNF396Q96N95 335 aaPredicted RBP21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 PRKD2Q9BZL6 878 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 LIMD1Q9UGP4 676 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 SORCS3Q9UPU3 1222 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 BACE2Q9Y5Z0 518 aa21.39■■□□□ 1.01
TSPAN4-209ENST00000409543 MYO10Q9HD67 2058 aa21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 A0A0B4J269 797 aa21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 TTC26A0AVF1 554 aa21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 MYMKA6NI61 221 aa21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 I3L4J1 428 aa21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 OGTO15294 1046 aa21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 ADAM12O43184 909 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms