RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 PARD3BQ8TEW8 1205 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 ZNF516Q92618 1163 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 CASD1Q96PB1 797 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 FNBP1Q96RU3 617 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 MTMR12Q9C0I1 747 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 ELAC1Q9H777 363 aaKnown RBP15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 GIT1Q9Y2X7 761 aa15.29■□□□□ 0.04
CHRNA1-204ENST00000409323 PES1O00541 588 aaKnown RBP15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 EFCAB14O75071 495 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 DGKIO75912 1065 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 PBX3P40426 434 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 GCLMP48507 274 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 PLCB2Q00722 1185 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 PPP3CAQ08209 521 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 TMEM132DQ14C87 1099 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 KRT31Q15323 416 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 TCP11X2Q5H9J9 407 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 NOMO2Q5JPE7 1267 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 FOXR2Q6PJQ5 311 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 ZNF280BQ86YH2 543 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 TMEM174Q8WUU8 243 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 MKNK1Q9BUB5 465 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 VPS16Q9H269 839 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 CNTN3Q9P232 1028 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 LAMA2P24043 3122 aaKnown RBP15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 CASTOR2A6NHX0 329 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 LRRN2O75325 713 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 IL18RAPO95256 599 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 ZNF18P17022 549 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 IGFBP6P24592 240 aaPredicted RBP15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 RNASELQ05823 741 aaKnown RBP15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 KYAT1Q16773 422 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 INTS8Q75QN2 995 aaKnown RBP15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 FRMD5Q7Z6J6 570 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 YME1L1Q96TA2 773 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 CGRRF1Q99675 332 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 PAAF1Q9BRP4 392 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 TBC1D13Q9NVG8 400 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 DNAJB4Q9UDY4 337 aa15.28■□□□□ 0.04
CHRNA1-204ENST00000409323 RANBP2P49792 3224 aaKnown RBP15.27■□□□□ 0.04
CHRNA1-204ENST00000409323 LCHNA4D1U4 455 aa15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 F8W810 466 aa15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 DDHD2O94830 711 aa15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 CAVIN2O95810 425 aa15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 THP07101 528 aa15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 RASIP1Q5U651 963 aa15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 HERC6Q8IVU3 1022 aa15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 FAM114A1Q8IWE2 563 aa15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 TRIM59Q8IWR1 403 aa15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 SLC35C1Q96A29 364 aa15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 TUBGCP2Q9BSJ2 902 aa15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 MTIF3Q9H2K0 278 aaKnown RBP15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 PLEKHA5Q9HAU0 1116 aa15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.27■□□□□ 0.03
CHRNA1-204ENST00000409323 PPEF2O14830 753 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 MAPK13O15264 365 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 ZC3H11AO75152 810 aaKnown RBP eCLIP15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 CLSTN1O94985 981 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 GJB5O95377 273 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 GNA14O95837 355 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 KRT19P08727 400 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 TMEM191BP0C7N4 346 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 BIRC3Q13489 604 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 CBWD6Q4V339 395 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 XKR4Q5GH76 650 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 CBWD3Q5JTY5 395 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 CBWD5Q5RIA9 395 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 SPRED2Q7Z698 418 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 URGCPQ8TCY9 931 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 TMC2Q8TDI7 906 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 HASPINQ8TF76 798 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 PPP1R10Q96QC0 940 aaKnown RBP15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 SLC9A7Q96T83 725 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 TMEM117Q9H0C3 514 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 ASB7Q9H672 318 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 METTL14Q9HCE5 456 aaKnown RBP15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 UBN1Q9NPG3 1134 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 INTS13Q9NVM9 706 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 SCN1AP35498 2009 aa15.26■□□□□ 0.03
CHRNA1-204ENST00000409323 KIAA1671Q9BY89 1806 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 GOLGA6L3A6NEY3 463 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 NT5C1B-RDH14C9J2C7 533 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 TLL1O43897 1013 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 ARHGEF15O94989 841 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 KCNE1P15382 129 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 PBX2P40425 430 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 MARSP56192 900 aaKnown RBP15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 KCNH2Q12809 1159 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 BTG3Q14201 252 aaPredicted RBP15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 NAB2Q15742 525 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 MIIPQ5JXC2 388 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 SPOUT1Q5T280 376 aaKnown RBP15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 TDRD10Q5VZ19 366 aaKnown RBP15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 WDR49Q8IV35 697 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 C1orf127Q8N9H9 656 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 ZNF689Q96CS4 500 aaPredicted RBP15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 NRDE2Q9H7Z3 1164 aa15.25■□□□□ 0.03
CHRNA1-204ENST00000409323 DPP3Q9NY33 737 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms