RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 CPA1P15085 419 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 ELF1P32519 619 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 HSPA4P34932 840 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 GPC5P78333 572 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 IRX6P78412 446 aaPredicted RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 CSTF1Q05048 431 aaKnown RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 TUSC3Q13454 348 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 SNW1Q13573 536 aaKnown RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 PSMD5Q16401 504 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 RSPO4Q2I0M5 234 aaPredicted RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 UVSSAQ2YD98 709 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 SLC44A4Q53GD3 710 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 FAM171A1Q5VUB5 890 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 ZNF852Q6ZMS4 543 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 TAS1R1Q7RTX1 841 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 RNF168Q8IYW5 571 aaPredicted RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 SMG8Q8ND04 991 aaKnown RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 ZNF707Q96C28 371 aaPredicted RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 ZNF274Q96GC6 653 aaPredicted RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 CPB2Q96IY4 423 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 PRIMPOLQ96LW4 560 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 ZFP42Q96MM3 310 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 IER2Q9BTL4 223 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 EIF2AQ9BY44 585 aaKnown RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 AGXT2Q9BYV1 514 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 FOXQ1Q9C009 403 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 C2orf40Q9H1Z8 148 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 MINDY3Q9H8M7 445 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 NCOA5Q9HCD5 579 aaKnown RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 ANKEF1Q9NU02 776 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 PRMT7Q9NVM4 692 aaPredicted RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 ZSCAN32Q9NX65 697 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 TOR4AQ9NXH8 423 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 FBXW11Q9UKB1 542 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 KCNH3Q9ULD8 1083 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 USP18Q9UMW8 372 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 MRPS23Q9Y3D9 190 aaKnown RBP8.57□□□□□ -1.04
LSM5-202ENST00000409292 SNX14Q9Y5W7 946 aa8.57□□□□□ -1.04
LSM5-202ENST00000409292 MED19A0JLT2 244 aaPredicted RBP8.56□□□□□ -1.04
LSM5-202ENST00000409292 LRRIQ4A6NIV6 560 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 EML1O00423 815 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 WNT7AO00755 349 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 N4BP3O15049 544 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 ADAMTS3O15072 1205 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 B4GALT3O60512 393 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 FOXD2O60548 495 aaPredicted RBP8.56□□□□□ -1.04
LSM5-202ENST00000409292 PAPLNO95428 1278 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 LRG1P02750 347 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 JUNDP17535 347 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 ARF4P18085 180 aaPredicted RBP8.56□□□□□ -1.04
LSM5-202ENST00000409292 RPL17P18621 184 aaKnown RBP8.56□□□□□ -1.04
LSM5-202ENST00000409292 AKAP5P24588 427 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 AFF1P51825 1210 aaKnown RBP8.56□□□□□ -1.04
LSM5-202ENST00000409292 EVCP57679 992 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 GUCA2AQ02747 115 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 CYP4A11Q02928 519 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 CTTNQ14247 550 aaKnown RBP8.56□□□□□ -1.04
LSM5-202ENST00000409292 PABPC1LQ4VXU2 614 aaKnown RBP8.56□□□□□ -1.04
LSM5-202ENST00000409292 LILRA6Q6PI73 481 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 RUFY3Q7L099 469 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 ELMOD1Q8N336 334 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 MCPH1Q8NEM0 835 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 PIK3R5Q8WYR1 880 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 FGF13Q92913 245 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 KCNB2Q92953 911 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 DYDC2Q96IM9 177 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 REPIN1Q9BWE0 567 aaKnown RBP8.56□□□□□ -1.04
LSM5-202ENST00000409292 NFKBIZQ9BYH8 718 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 GPR62Q9BZJ7 368 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 NXF3Q9H4D5 531 aaKnown RBP8.56□□□□□ -1.04
LSM5-202ENST00000409292 KCNMB3Q9NPA1 279 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 DLL3Q9NYJ7 618 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 VAV3Q9UKW4 847 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 PCDHA12Q9UN75 941 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 HES2Q9Y543 173 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 TRIOO75962 3097 aa8.56□□□□□ -1.04
LSM5-202ENST00000409292 C2orf16Q68DN1 1984 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 A0A1B0GUA9 196 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 ZNF197O14709 1029 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 CCL16O15467 120 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 EPB41L2O43491 1005 aaKnown RBP8.55□□□□□ -1.04
LSM5-202ENST00000409292 SLC37A4O43826 429 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 POU2F2P09086 479 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 XRCC6P12956 609 aaKnown RBP eCLIP8.55□□□□□ -1.04
LSM5-202ENST00000409292 MBTD1Q05BQ5 628 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 TRIM29Q14134 588 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 PPP2R5AQ15172 486 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 CALCRLQ16602 461 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 MAPK6Q16659 721 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 AXDND1Q5T1B0 1012 aaPredicted RBP8.55□□□□□ -1.04
LSM5-202ENST00000409292 PRSS55Q6UWB4 352 aaPredicted RBP8.55□□□□□ -1.04
LSM5-202ENST00000409292 PARM1Q6UWI2 310 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.55□□□□□ -1.04
LSM5-202ENST00000409292 TPRG1Q6ZUI0 275 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 PIK3AP1Q6ZUJ8 805 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 ANKS3Q6ZW76 656 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 DCLK2Q8N568 766 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 ERMNQ8TAM6 284 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 SLC7A14Q8TBB6 771 aa8.55□□□□□ -1.04
LSM5-202ENST00000409292 DNASE1L2Q92874 299 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms