RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SERPINB9P50453 376 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 XRCC4Q13426 336 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 SLFN12LQ6IEE8 588 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 ARID3BQ8IVW6 561 aaPredicted RBP18.63■□□□□ 0.57
SMPD4-202ENST00000409031 C18orf8Q96DM3 657 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 ABLIM1O14639 778 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 SNRPAP09012 282 aaKnown RBP18.63■□□□□ 0.57
SMPD4-202ENST00000409031 ROR1Q01973 937 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 TAP1Q03518 808 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 GABPAQ06546 454 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 CC2D2BQ6DHV5 1058 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 SETD3Q86TU7 594 aaPredicted RBP18.63■□□□□ 0.57
SMPD4-202ENST00000409031 FBXL13Q8NEE6 735 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 MKNK1Q9BUB5 465 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 SNX25Q9H3E2 840 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 NRBP2Q9NSY0 501 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 AP4S1Q9Y587 144 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 C16orf96A6NNT2 1141 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 XPO1O14980 1071 aaKnown RBP18.62■□□□□ 0.57
SMPD4-202ENST00000409031 ATICP31939 592 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 LRRC74BQ6ZQY2 392 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 RMDN2Q96LZ7 410 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 ABCF3Q9NUQ8 709 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 MRGBPQ9NV56 204 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 NXF1Q9UBU9 619 aaKnown RBP18.62■□□□□ 0.57
SMPD4-202ENST00000409031 SALL1Q9NSC2 1324 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 E9PCH4 1651 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 LDHAP00338 332 aaKnown RBP18.62■□□□□ 0.57
SMPD4-202ENST00000409031 KRT16P08779 473 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 OVGP1Q12889 678 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 RIPK1Q13546 671 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 TRIM16LQ309B1 348 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 PADI6Q6TGC4 694 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 SCG3Q8WXD2 468 aaKnown RBP18.62■□□□□ 0.57
SMPD4-202ENST00000409031 JADE3Q92613 823 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 PACSIN1Q9BY11 444 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 SLC38A10Q9HBR0 1119 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 EYA4O95677 639 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 CHEK2O96017 543 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 TFAMQ00059 246 aaKnown RBP18.62■□□□□ 0.57
SMPD4-202ENST00000409031 SYDE2Q5VT97 1194 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 KLHL4Q9C0H6 718 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 NGRNQ9NPE2 291 aaKnown RBP18.62■□□□□ 0.57
SMPD4-202ENST00000409031 CCPG1Q9ULG6 757 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 PIK3R2O00459 728 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 TBXAS1P24557 533 aaPredicted RBP18.62■□□□□ 0.57
SMPD4-202ENST00000409031 FAM81AQ8TBF8 368 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 GTSE1Q9NYZ3 720 aa18.62■□□□□ 0.57
SMPD4-202ENST00000409031 H0Y626 953 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 TRIM16O95361 564 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 LRRC8EQ6NSJ5 796 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 MIGA2Q7L4E1 593 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
SMPD4-202ENST00000409031 PRCCQ92733 491 aaPredicted RBP18.61■□□□□ 0.57
SMPD4-202ENST00000409031 FAM149B1Q96BN6 582 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 ZNF212Q9UDV6 495 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 SEPT9Q9UHD8 586 aaPredicted RBP18.61■□□□□ 0.57
SMPD4-202ENST00000409031 USP17L15C9J2P7 530 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 USP17L13C9JLJ4 530 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 USP17L11C9JVI0 530 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 USP17L18D6R9N7 530 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 USP17L22D6RA61 530 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 USP17L17D6RBQ6 530 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 USP17L19D6RCP7 530 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 USP17L20D6RJB6 530 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 CDC25CP30307 473 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 PRELPP51888 382 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 USP17L24Q0WX57 530 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 INPP5AQ14642 412 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 USP17L6PQ6QN14 398 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 PODNQ7Z5L7 613 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 CCNYL1Q8N7R7 359 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 DHX38Q92620 1227 aaKnown RBP18.61■□□□□ 0.57
SMPD4-202ENST00000409031 KLF6Q99612 283 aaPredicted RBP18.61■□□□□ 0.57
SMPD4-202ENST00000409031 ZNF184Q99676 751 aaPredicted RBP18.61■□□□□ 0.57
SMPD4-202ENST00000409031 CAAP1Q9H8G2 361 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.61■□□□□ 0.574e-6■■□□□ 13.5
SMPD4-202ENST00000409031 SAR1AQ9NR31 198 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 SCHIP1Q9P0W5 487 aaPredicted RBP18.61■□□□□ 0.57
SMPD4-202ENST00000409031 CNTNAP5Q8WYK1 1306 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 SEC24DO94855 1032 aaPredicted RBP18.61■□□□□ 0.57
SMPD4-202ENST00000409031 BSDC1Q9NW68 430 aaPredicted RBP18.61■□□□□ 0.57
SMPD4-202ENST00000409031 HEY1Q9Y5J3 304 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 OPLAHO14841 1288 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 RIPK2O43353 540 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 E2F6O75461 281 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 ENO3P13929 434 aaPredicted RBP18.61■□□□□ 0.57
SMPD4-202ENST00000409031 PEX5P50542 639 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 ADPGKQ9BRR6 497 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 BTBD10Q9BSF8 475 aa18.61■□□□□ 0.57
SMPD4-202ENST00000409031 NRXN1Q9ULB1 1477 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 ARHGDIAP52565 204 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 TTLL12Q14166 644 aaPredicted RBP18.6■□□□□ 0.57
SMPD4-202ENST00000409031 NTRK3Q16288 839 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 DRD4P21917 467 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 GNA15P30679 374 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 IFI35P80217 286 aaPredicted RBP18.6■□□□□ 0.57
SMPD4-202ENST00000409031 IQCKQ8N0W5 287 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 SNAP23O00161 211 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 TMPRSS6Q8IU80 811 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms