RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 SNRNP35Q16560 246 aaKnown RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 Q4G0T1 1027 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 RASGRP2Q7LDG7 609 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 RASSF3Q86WH2 238 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 ANKRD13AQ8IZ07 590 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 GPRASP2Q96D09 838 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 FMO2Q99518 471 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 POLR3CQ9BUI4 534 aaPredicted RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 DDX56Q9NY93 547 aaKnown RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 APEX2Q9UBZ4 518 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 PLAAQ9Y263 795 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 FAN1Q9Y2M0 1017 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 NOC2LQ9Y3T9 749 aaKnown RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 MAST2Q6P0Q8 1798 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 COL11A2P13942 1736 aaPredicted RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 SLIT2O94813 1529 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 EXOC1LA0A1B0GW35 172 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 ANO9A1A5B4 782 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 DYNC1LI2O43237 492 aaPredicted RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 ATP8B1O43520 1251 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 ATP1A1P05023 1023 aaKnown RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 CYP2B6P20813 491 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 FMO5P49326 533 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 SULT1E1P49888 294 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 SREBF2Q12772 1141 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 BTG3Q14201 252 aaPredicted RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 MAP7Q14244 749 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 DUOXA2Q1HG44 320 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 BEND6Q5SZJ8 279 aaPredicted RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 CENPUQ71F23 418 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 PTF1AQ7RTS3 328 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 C14orf80Q86SX3 495 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 GLYCTKQ8IVS8 523 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 MICAL1Q8TDZ2 1067 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 PARD3BQ8TEW8 1205 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 RSRC1Q96IZ7 334 aaKnown RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 KLC2Q9H0B6 622 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 SAYSD1Q9NPB0 183 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 INTS9Q9NV88 658 aaKnown RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 PARVAQ9NVD7 372 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 SALL4Q9UJQ4 1053 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 TUBE1Q9UJT0 475 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 ADGRG1Q9Y653 693 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 ANK2Q01484 3957 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 PLXNA1Q9UIW2 1896 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 DCDC2CA8MYV0 355 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 PPP1R3GB7ZBB8 358 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 KBTBD13C9JR72 458 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 GOLGA8MH3BSY2 632 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 EXTL3O43909 919 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 NOL3O60936 208 aaKnown RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 TADA3O75528 432 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 ECHS1P30084 290 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 EPHX2P34913 555 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 IFNAR2P48551 515 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 COG7P83436 770 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 DDR1Q08345 913 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 TROAPQ12815 778 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 TSTA3Q13630 321 aaPredicted RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 TMEM132DQ14C87 1099 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 SEC23AQ15436 765 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 DGKDQ16760 1214 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 GLE1Q53GS7 698 aaKnown RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 EFCAB12Q6NXP0 572 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 TRIM72Q6ZMU5 477 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 USP49Q70CQ1 688 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 LRRC71Q8N4P6 559 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 NOA1Q8NC60 698 aaKnown RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 APPL2Q8NEU8 664 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 SEPT1Q8WYJ6 367 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 AKT1S1Q96B36 256 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 RNF25Q96BH1 459 aaPredicted RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 HDAC11Q96DB2 347 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 RIT2Q99578 217 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 WNT8AQ9H1J5 351 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 UBN1Q9NPG3 1134 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 KLHL11Q9NVR0 708 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 DDX20Q9UHI6 824 aaKnown RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 POLIQ9UNA4 740 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 PPP2R3BQ9Y5P8 575 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 LMO7Q8WWI1 1683 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 AXIN1O15169 862 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 ACSL3O95573 720 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 ALDH2P05091 517 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 VCAM1P19320 739 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 SDC4P31431 198 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 SHMT1P34896 483 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 CPT1AP50416 773 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 RPS6P62753 249 aaKnown RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 ROR1Q01973 937 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 STK4Q13043 487 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 NR1I3Q14994 352 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 RPS6KA2Q15349 733 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 BBS9Q3SYG4 887 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 FAM102AQ5T9C2 384 aaPredicted RBP4.02□□□□□ -1.77
RGPD4-201ENST00000408999 ATF7IP2Q5U623 682 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 ALS2CLQ60I27 953 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 XRRA1Q6P2D8 792 aa4.02□□□□□ -1.77
RGPD4-201ENST00000408999 BZW1Q7L1Q6 419 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms