RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 NBPF15Q8N660 670 aa14.08□□□□□ -0.16
SNED1-205ENST00000405547 PRPF38AQ8NAV1 312 aaKnown RBP14.08□□□□□ -0.16
SNED1-205ENST00000405547 MASTLQ96GX5 879 aa14.08□□□□□ -0.16
SNED1-205ENST00000405547 MOV10L1Q9BXT6 1211 aaKnown RBP14.08□□□□□ -0.16
SNED1-205ENST00000405547 POLR3FQ9H1D9 316 aaPredicted RBP14.08□□□□□ -0.16
SNED1-205ENST00000405547 EHD2Q9NZN4 543 aa14.08□□□□□ -0.16
SNED1-205ENST00000405547 GOLGA8RI6L899 631 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 SEC24CP53992 1094 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 MTHFD1LQ6UB35 978 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 PBXIP1Q96AQ6 731 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 MTMR4Q9NYA4 1195 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 GGT7Q9UJ14 662 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 PCDHA10Q9Y5I2 948 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 SERPINB9P50453 376 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 MYCBPAPQ8TBZ2 947 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 MTBPQ96DY7 904 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 POLD4Q9HCU8 107 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 HSPBP1Q9NZL4 362 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 CNTNAP5Q8WYK1 1306 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 ZBTB22O15209 634 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 KCNA3P22001 575 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 TBCCQ15814 346 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 PAPD7Q5XG87 772 aaKnown RBP14.07□□□□□ -0.16
SNED1-205ENST00000405547 BARGINQ6ZT62 677 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 RTKN2Q8IZC4 609 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 TRIM62Q9BVG3 475 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 ASPSCR1Q9BZE9 553 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 KDM4CQ9H3R0 1056 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 KCNN4O15554 427 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 KLRC1P26715 233 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 ZNF543Q08ER8 600 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 FIGNQ5HY92 759 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 DSTYKQ6XUX3 929 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 C3orf62Q6ZUJ4 267 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 RFX8Q6ZV50 586 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 RGL1Q9NZL6 768 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 ALG6Q9Y672 507 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 P4HA2O15460 535 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 NMT1P30419 496 aaKnown RBP14.07□□□□□ -0.16
SNED1-205ENST00000405547 ALDH18A1P54886 795 aaKnown RBP14.07□□□□□ -0.16
SNED1-205ENST00000405547 EAPPQ56P03 285 aaPredicted RBP14.07□□□□□ -0.16
SNED1-205ENST00000405547 EFHC2Q5JST6 749 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 DTX3LQ8TDB6 740 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 ARHGEF28Q8N1W1 1705 aaKnown RBP14.07□□□□□ -0.16
SNED1-205ENST00000405547 CRYMQ14894 314 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 CATSPER4Q7RTX7 472 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 SLC30A5Q8TAD4 765 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 XPO7Q9UIA9 1087 aaKnown RBP14.07□□□□□ -0.16
SNED1-205ENST00000405547 HPSEQ9Y251 543 aa14.07□□□□□ -0.16
SNED1-205ENST00000405547 TMEM247A6NEH6 219 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 LRRC31Q6UY01 552 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 NPHP3-ACAD11A0A0J9YXS1 232 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 EFNA5P52803 228 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 ACTR2P61160 394 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 STX3Q13277 289 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 CUL3Q13618 768 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 CYB5D1Q6P9G0 228 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 ANKMY2Q8IV38 441 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 NDUFAF2Q8N183 169 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 OSBPL8Q9BZF1 889 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 DHX35Q9H5Z1 703 aaKnown RBP14.06□□□□□ -0.16
SNED1-205ENST00000405547 KLK7P49862 253 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 PTPAQ15257 358 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 SWSAP1Q6NVH7 229 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 THTPAQ9BU02 230 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 SLC13A4Q9UKG4 626 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 PCDHB2Q9Y5E7 798 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 FNTAP49354 379 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 KPNB1Q14974 876 aaKnown RBP14.06□□□□□ -0.16
SNED1-205ENST00000405547 ZNF677Q86XU0 584 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 OR2W6PQ8NHA6 318 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 KRT4P19013 534 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 MRPL1Q9BYD6 325 aaKnown RBP14.06□□□□□ -0.16
SNED1-205ENST00000405547 FNDC3AQ9Y2H6 1198 aaKnown RBP14.06□□□□□ -0.16
SNED1-205ENST00000405547 ZBTB24O43167 697 aaPredicted RBP14.06□□□□□ -0.16
SNED1-205ENST00000405547 ADRA2BP18089 450 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 CENPCQ03188 943 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 MAPK7Q13164 816 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 FASTKD1Q53R41 847 aaKnown RBP14.06□□□□□ -0.16
SNED1-205ENST00000405547 C1orf228Q6PIY5 440 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 THEM5Q8N1Q8 247 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 IFT43Q96FT9 208 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 PNMA3Q9UL41 463 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 INPP5FQ9Y2H2 1132 aa14.06□□□□□ -0.16
SNED1-205ENST00000405547 CAPRIN1Q14444 709 aaKnown RBP14.05□□□□□ -0.16
SNED1-205ENST00000405547 IMPG1Q17R60 797 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 RAPGEF5Q92565 580 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 GPR101Q96P66 508 aaPredicted RBP14.05□□□□□ -0.16
SNED1-205ENST00000405547 ZC3H7BQ9UGR2 993 aaKnown RBP14.05□□□□□ -0.16
SNED1-205ENST00000405547 PTPRUQ92729 1446 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 MAGEA4P43358 317 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 SNRNP35Q16560 246 aaKnown RBP14.05□□□□□ -0.16
SNED1-205ENST00000405547 HABP4Q5JVS0 413 aaKnown RBP14.05□□□□□ -0.16
SNED1-205ENST00000405547 TMEM154Q6P9G4 183 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 NOD2Q9HC29 1040 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 IGF2BP3O00425 579 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNED1-205ENST00000405547 CSF1RP07333 972 aa14.05□□□□□ -0.16
SNED1-205ENST00000405547 CACNB3P54284 484 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms