RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 FAM212AQ96EL1 285 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 TSPAN18Q96SJ8 248 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 TSPYL2Q9H2G4 693 aaPredicted RBP23.79■■□□□ 1.4
EPCAM-202ENST00000405271 MMRN2Q9H8L6 949 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 HES2Q9Y543 173 aa23.79■■□□□ 1.4
EPCAM-202ENST00000405271 ITGA4P13612 1032 aa23.78■■□□□ 1.4
EPCAM-202ENST00000405271 KRT39Q6A163 491 aa23.78■■□□□ 1.4
EPCAM-202ENST00000405271 PGBD4Q96DM1 585 aa23.78■■□□□ 1.4
EPCAM-202ENST00000405271 APOL6Q9BWW8 343 aa23.78■■□□□ 1.4
EPCAM-202ENST00000405271 DERAQ9Y315 318 aa23.78■■□□□ 1.4
EPCAM-202ENST00000405271 C2CD2Q9Y426 696 aa23.78■■□□□ 1.4
EPCAM-202ENST00000405271 LACTBL1A8MY62 500 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 MEFVO15553 781 aaPredicted RBP23.77■■□□□ 1.4
EPCAM-202ENST00000405271 GCLMP48507 274 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 CBWD6Q4V339 395 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 CBWD3Q5JTY5 395 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 CBWD5Q5RIA9 395 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 PSRC1Q6PGN9 363 aaPredicted RBP23.77■■□□□ 1.4
EPCAM-202ENST00000405271 GBP6Q6ZN66 633 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 C15orf39Q6ZRI6 1047 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 SLC24A5Q71RS6 500 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 RPUSD2Q8IZ73 545 aaKnown RBP23.77■■□□□ 1.4
EPCAM-202ENST00000405271 LINC01599Q8WXQ3 324 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 PDLIM2Q96JY6 352 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 POP1Q99575 1024 aaKnown RBP23.77■■□□□ 1.4
EPCAM-202ENST00000405271 TMEM117Q9H0C3 514 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 CNTN3Q9P232 1028 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 PARP2Q9UGN5 583 aa23.77■■□□□ 1.4
EPCAM-202ENST00000405271 PTPRJQ12913 1337 aa23.77■■□□□ 1.39
EPCAM-202ENST00000405271 SCN1AP35498 2009 aa23.76■■□□□ 1.39
EPCAM-202ENST00000405271 C9IYK1 514 aa23.76■■□□□ 1.39
EPCAM-202ENST00000405271 PFKMP08237 780 aa23.76■■□□□ 1.39
EPCAM-202ENST00000405271 CCDC173Q0VFZ6 552 aa23.76■■□□□ 1.39
EPCAM-202ENST00000405271 SYCP1Q15431 976 aa23.76■■□□□ 1.39
EPCAM-202ENST00000405271 ZACNQ401N2 412 aa23.76■■□□□ 1.39
EPCAM-202ENST00000405271 XKR4Q5GH76 650 aa23.76■■□□□ 1.39
EPCAM-202ENST00000405271 RASIP1Q5U651 963 aa23.76■■□□□ 1.39
EPCAM-202ENST00000405271 SPECC1LQ69YQ0 1117 aa23.76■■□□□ 1.39
EPCAM-202ENST00000405271 CNKSR3Q6P9H4 555 aa23.76■■□□□ 1.39
EPCAM-202ENST00000405271 ECHDC2Q86YB7 292 aa23.76■■□□□ 1.39
EPCAM-202ENST00000405271 EFCAB13Q8IY85 973 aa23.76■■□□□ 1.39
EPCAM-202ENST00000405271 TULP1O00294 542 aaPredicted RBP23.75■■□□□ 1.39
EPCAM-202ENST00000405271 FGBP02675 491 aa23.75■■□□□ 1.39
EPCAM-202ENST00000405271 TMEM191BP0C7N4 346 aa23.75■■□□□ 1.39
EPCAM-202ENST00000405271 AKAP5P24588 427 aa23.75■■□□□ 1.39
EPCAM-202ENST00000405271 EXOC3L4Q17RC7 722 aa23.75■■□□□ 1.39
EPCAM-202ENST00000405271 ALKAL1Q6UXT8 129 aa23.75■■□□□ 1.39
EPCAM-202ENST00000405271 CACTINQ8WUQ7 758 aaKnown RBP23.75■■□□□ 1.39
EPCAM-202ENST00000405271 ANKRD36BP1Q96IX9 119 aa23.75■■□□□ 1.39
EPCAM-202ENST00000405271 UBN1Q9NPG3 1134 aa23.75■■□□□ 1.39
EPCAM-202ENST00000405271 GCNT4Q9P109 453 aa23.75■■□□□ 1.39
EPCAM-202ENST00000405271 SIK3Q9Y2K2 1263 aa23.75■■□□□ 1.39
EPCAM-202ENST00000405271 GIT1Q9Y2X7 761 aa23.75■■□□□ 1.39
EPCAM-202ENST00000405271 COQ4Q9Y3A0 265 aa23.75■■□□□ 1.39
EPCAM-202ENST00000405271 EOMESO95936 686 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 TNNC2P02585 160 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 C4BPAP04003 597 aaKnown RBP23.74■■□□□ 1.39
EPCAM-202ENST00000405271 NFICP08651 508 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 ATF7P17544 494 aaPredicted RBP23.74■■□□□ 1.39
EPCAM-202ENST00000405271 SMAD3P84022 425 aaKnown RBP23.74■■□□□ 1.39
EPCAM-202ENST00000405271 TMEM132DQ14C87 1099 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 DUOXA2Q1HG44 320 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 EPC2Q52LR7 807 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 LMBRD2Q68DH5 695 aaPredicted RBP23.74■■□□□ 1.39
EPCAM-202ENST00000405271 JADE1Q6IE81 842 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 SV2AQ7L0J3 742 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 TMC6Q7Z403 805 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 DEFB128Q7Z7B8 93 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 ZNF598Q86UK7 904 aaKnown RBP23.74■■□□□ 1.39
EPCAM-202ENST00000405271 RTN4RL1Q86UN2 441 aaPredicted RBP23.74■■□□□ 1.39
EPCAM-202ENST00000405271 DRC7Q8IY82 874 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 HERVK_113Q902F9 699 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 ZNF516Q92618 1163 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 IQCDQ96DY2 449 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 RNF216Q9NWF9 866 aaPredicted RBP23.74■■□□□ 1.39
EPCAM-202ENST00000405271 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.74■■□□□ 1.391e-6■□□□□ 8.1
EPCAM-202ENST00000405271 KCNE1P15382 129 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 FAM189BP81408 668 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 KCNMA1Q12791 1236 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 TRIM14Q14142 442 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 Q7L0L9 218 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 OTOP2Q7RTS6 562 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 DEFB123Q8N688 67 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 FBXL13Q8NEE6 735 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 OR5B17Q8NGF7 314 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 MTMR12Q9C0I1 747 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 RNF39Q9H2S5 420 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 ELAC1Q9H777 363 aaKnown RBP23.74■■□□□ 1.39
EPCAM-202ENST00000405271 CXXC1Q9P0U4 656 aaPredicted RBP23.74■■□□□ 1.39
EPCAM-202ENST00000405271 IMPACTQ9P2X3 320 aa23.74■■□□□ 1.39
EPCAM-202ENST00000405271 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.74■■□□□ 1.39
EPCAM-202ENST00000405271 GOLGA6L6A8MZA4 724 aa23.73■■□□□ 1.39
EPCAM-202ENST00000405271 XPOTO43592 962 aaKnown RBP23.73■■□□□ 1.39
EPCAM-202ENST00000405271 TFAMQ00059 246 aaKnown RBP23.73■■□□□ 1.39
EPCAM-202ENST00000405271 BIRC3Q13489 604 aa23.73■■□□□ 1.39
EPCAM-202ENST00000405271 TDRD10Q5VZ19 366 aaKnown RBP23.73■■□□□ 1.39
EPCAM-202ENST00000405271 AGMOQ6ZNB7 445 aa23.73■■□□□ 1.39
EPCAM-202ENST00000405271 KIF12Q96FN5 646 aa23.73■■□□□ 1.39
EPCAM-202ENST00000405271 PCMTD1Q96MG8 357 aaPredicted RBP23.73■■□□□ 1.39
EPCAM-202ENST00000405271 RPS6KC1Q96S38 1066 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms