RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 C16orf45Q96MC5 204 aaPredicted RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 RBM14Q96PK6 669 aaKnown RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 MMP19Q99542 508 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 SLF1Q9BQI6 1058 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 TEX13BQ9BXU2 312 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 SENP6Q9GZR1 1112 aaPredicted RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 NAPBQ9H115 298 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 DNAJC25Q9H1X3 360 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 PIH1D1Q9NWS0 290 aaKnown RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 FOXD3Q9UJU5 478 aaPredicted RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 ZNF214Q9UL59 606 aaPredicted RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 FAM184BQ9ULE4 1060 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 R3HDM2Q9Y2K5 976 aaKnown RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 SH3GLB1Q9Y371 365 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 DDX60LQ5H9U9 1706 aaKnown RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 IGKV6D-41A0A0C4DH26 115 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 AKR1B15C9JRZ8 316 aaPredicted RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 TNFRSF21O75509 655 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 PRDM1O75626 825 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 SMNDC1O75940 238 aaKnown RBP eCLIP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 TTLL1O95922 423 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 GZMAP12544 262 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 LIG3P49916 1009 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 BLVRAP53004 296 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 STIM1Q13586 685 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 LRRC26Q2I0M4 334 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 ZC3H12BQ5HYM0 836 aaKnown RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 BEND6Q5SZJ8 279 aaPredicted RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 ANO1Q5XXA6 986 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 ARHGEF18Q6ZSZ5 1173 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 MAATS1Q7Z4T9 603 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 STRA8Q7Z7C7 330 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 CABP7Q86V35 215 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 REPS2Q8NFH8 660 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 GPR152Q8TDT2 470 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 RPGRIP1Q96KN7 1286 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 SH3GLB2Q9NR46 395 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 SEPT11Q9NVA2 429 aaKnown RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 MTMR4Q9NYA4 1195 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 TRAF3IP3Q9Y228 551 aa6.6□□□□□ -1.35
CLIP4-202ENST00000401605 MRPL11Q9Y3B7 192 aaKnown RBP6.6□□□□□ -1.35
CLIP4-202ENST00000401605 CCDC162PA2VCL2 907 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 KBTBD13C9JR72 458 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 KLHL41O60662 606 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 TADA3O75528 432 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 TSPY3P0CV98 308 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 TSPY8P0CW00 308 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 GNAT1P11488 350 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 NCAM1P13591 858 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 PRLRP16471 622 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 TMOD1P28289 359 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 DDIT3P35638 169 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 TUFMP49411 452 aaKnown RBP6.59□□□□□ -1.35
CLIP4-202ENST00000401605 GDF10P55107 478 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 GEMIN4P57678 1058 aaKnown RBP6.59□□□□□ -1.35
CLIP4-202ENST00000401605 MORC3Q14149 939 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 WDR44Q5JSH3 913 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 BRICD5Q6PL45 260 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 CATSPER4Q7RTX7 472 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 AFAP1L2Q8N4X5 818 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 NEDD1Q8NHV4 660 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 NINJ1Q92982 152 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 MTMR8Q96EF0 704 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 TBC1D32Q96NH3 1257 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 SEC62Q99442 399 aaKnown RBP6.59□□□□□ -1.35
CLIP4-202ENST00000401605 NUP88Q99567 741 aaPredicted RBP6.59□□□□□ -1.35
CLIP4-202ENST00000401605 RSRP1Q9BUV0 290 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 TRIM8Q9BZR9 551 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 YIPF3Q9GZM5 350 aa6.59□□□□□ -1.35
CLIP4-202ENST00000401605 HTR3EA5X5Y0 456 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 BHMG1C9JSJ3 638 aaPredicted RBP6.59□□□□□ -1.36
CLIP4-202ENST00000401605 ATP2A1O14983 1001 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 ACTN4O43707 911 aaKnown RBP6.59□□□□□ -1.36
CLIP4-202ENST00000401605 PGK2P07205 417 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 UBL4AP11441 157 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 KRT10P13645 584 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 EPB42P16452 691 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 SERPINB3P29508 390 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 PPARAQ07869 468 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 STK3Q13188 491 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 ELF2Q15723 593 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 WHAMMP3Q1A5X7 153 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 ZNF792Q3KQV3 632 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 LRIT3Q3SXY7 679 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 BTN2A1Q7KYR7 527 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 TAOK1Q7L7X3 1001 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 DGKHQ86XP1 1220 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 TDHQ8IZJ6 230 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 GMCL1P1Q8NEA9 526 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 TMEM74Q96NL1 305 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 SERINC2Q96SA4 455 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 UBE2OQ9C0C9 1292 aaKnown RBP6.59□□□□□ -1.36
CLIP4-202ENST00000401605 NPHS2Q9NP85 383 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 SLC39A2Q9NP94 309 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 ACTR10Q9NZ32 417 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 FEM1BQ9UK73 627 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 LHX6Q9UPM6 363 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 TLR6Q9Y2C9 796 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 PCDHB2Q9Y5E7 798 aa6.59□□□□□ -1.36
CLIP4-202ENST00000401605 FOCADQ5VW36 1801 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms