RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 CCDC39Q9UFE4 941 aa17.34■□□□□ 0.37
ATG4B-203ENST00000400772 NR2E1Q9Y466 385 aa17.34■□□□□ 0.37
ATG4B-203ENST00000400772 VWA8A3KMH1 1905 aa17.33■□□□□ 0.37
ATG4B-203ENST00000400772 A0A087X0B3 334 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 CCDC195A0A1B0GUA6 201 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 K7ENM7 598 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 ADAM12O43184 909 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 RFPL2O75678 378 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 PIGRP01833 764 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 NMT1P30419 496 aaKnown RBP17.33■□□□□ 0.36
ATG4B-203ENST00000400772 ZXDAP98168 799 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 GTF2BQ00403 316 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 ELAVL2Q12926 359 aaKnown RBP17.33■□□□□ 0.36
ATG4B-203ENST00000400772 RRAGBQ5VZM2 374 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-203ENST00000400772 C15orf39Q6ZRI6 1047 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 HSCBQ8IWL3 235 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 KRI1Q8N9T8 703 aaKnown RBP17.33■□□□□ 0.36
ATG4B-203ENST00000400772 HDAC7Q8WUI4 952 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 ZHX3Q9H4I2 956 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 STK17AQ9UEE5 414 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 TECTAO75443 2155 aa17.33■□□□□ 0.36
ATG4B-203ENST00000400772 MYMKA6NI61 221 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 SPDYE4A6NLX3 237 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 I3L4J1 428 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 PODXLO00592 558 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 FAM189A1O60320 539 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 TBCAO75347 108 aaKnown RBP17.32■□□□□ 0.36
ATG4B-203ENST00000400772 SCP2P22307 547 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 TNFSF9P41273 254 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 BRCC3P46736 316 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 CREMQ03060 361 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 PSMD5Q16401 504 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 ZBTB41Q5SVQ8 909 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 SLC39A4Q6P5W5 647 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 DYMQ7RTS9 669 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 TMEM130Q8N3G9 435 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 DDX12PQ92771 950 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 ZNF707Q96C28 371 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-203ENST00000400772 BICD1Q96G01 975 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 DDX27Q96GQ7 796 aaKnown RBP17.32■□□□□ 0.36
ATG4B-203ENST00000400772 RHOBTB2Q9BYZ6 727 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 PANK2Q9BZ23 570 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 PLEKHA4Q9H4M7 779 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 SLC38A7Q9NVC3 462 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 TFIP11Q9UBB9 837 aaKnown RBP17.32■□□□□ 0.36
ATG4B-203ENST00000400772 DPP7Q9UHL4 492 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 USTQ9Y2C2 406 aa17.32■□□□□ 0.36
ATG4B-203ENST00000400772 CITO14578 2027 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 C2orf16Q68DN1 1984 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 MTCL1Q9Y4B5 1905 aaKnown RBP17.31■□□□□ 0.36
ATG4B-203ENST00000400772 CXCL8P10145 99 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 TKTP29401 623 aaKnown RBP17.31■□□□□ 0.36
ATG4B-203ENST00000400772 LIG4P49917 911 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 PTPN21Q16825 1174 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 ZC2HC1CQ53FD0 456 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-203ENST00000400772 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-203ENST00000400772 RSPO2Q6UXX9 243 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-203ENST00000400772 TRIM67Q6ZTA4 783 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 HFE2Q6ZVN8 426 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 SV2BQ7L1I2 683 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 ZNF720Q7Z2F6 126 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 ZDHHC14Q8IZN3 488 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 KREMEN2Q8NCW0 462 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-203ENST00000400772 DNAJC19Q96DA6 116 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 ST6GALNAC4Q9H4F1 302 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 PLEKHA5Q9HAU0 1116 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 MYO10Q9HD67 2058 aa17.31■□□□□ 0.36
ATG4B-203ENST00000400772 A0A0B4J269 797 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 TTC26A0AVF1 554 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 HNRNPDLO14979 420 aaKnown RBP17.3■□□□□ 0.36
ATG4B-203ENST00000400772 SPTLC2O15270 562 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 CLTAP09496 248 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 RPL9P32969 192 aaKnown RBP17.3■□□□□ 0.36
ATG4B-203ENST00000400772 TXLNAP40222 546 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 MATR3P43243 847 aaKnown RBP eCLIP17.3■□□□□ 0.36
ATG4B-203ENST00000400772 SPAG1Q07617 926 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 STK38Q15208 465 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 ZBTB6Q15916 424 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 CYP26C1Q6V0L0 522 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 SFR1Q86XK3 245 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 MAP4K3Q8IVH8 894 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 STRA6Q9BX79 667 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 TUBGCP4Q9UGJ1 667 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 LIMD1Q9UGP4 676 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 FBXW11Q9UKB1 542 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 DENND4AQ7Z401 1863 aa17.3■□□□□ 0.36
ATG4B-203ENST00000400772 TRIOO75962 3097 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 LACTBL1A8MY62 500 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 TISP43B9A030 160 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 ANKRD63C9JTQ0 380 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 TRAPPC3O43617 180 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 N4BP1O75113 896 aaKnown RBP17.29■□□□□ 0.36
ATG4B-203ENST00000400772 PPP6R2O75170 966 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 PPP1R37O75864 691 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 ADRB2P07550 413 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 PKP1Q13835 747 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 RAB33AQ14088 237 aa17.29■□□□□ 0.36
ATG4B-203ENST00000400772 ENOX2Q16206 610 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms