RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 GPAT2Q6NUI2 795 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 CCDC62Q6P9F0 684 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 EEPD1Q7L9B9 569 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 ATP8B4Q8TF62 1192 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 PRPF31Q8WWY3 499 aaKnown RBP16.87■□□□□ 0.29
CDC42-203ENST00000400259 OPTNQ96CV9 577 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 AVENQ9NQS1 362 aaPredicted RBP16.87■□□□□ 0.29
CDC42-203ENST00000400259 ANKFY1Q9P2R3 1169 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 AMACRQ9UHK6 382 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 CNTN6Q9UQ52 1028 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 PLXNB2O15031 1838 aa16.87■□□□□ 0.29
CDC42-203ENST00000400259 ATMINO43313 823 aaPredicted RBP16.86■□□□□ 0.29
CDC42-203ENST00000400259 MGAMO43451 1857 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 FAM189A1O60320 539 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 MSCO60682 206 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 PGK2P07205 417 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 ACO1P21399 889 aaKnown RBP16.86■□□□□ 0.29
CDC42-203ENST00000400259 CTNNA1P35221 906 aaKnown RBP16.86■□□□□ 0.29
CDC42-203ENST00000400259 AP3M2P53677 418 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 DRP2Q13474 957 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 MXD4Q14582 209 aaPredicted RBP16.86■□□□□ 0.29
CDC42-203ENST00000400259 MESDQ14696 234 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 BRSK2Q8IWQ3 736 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 SHCBP1Q8NEM2 672 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 KRT35Q92764 455 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 FAM84AQ96KN4 292 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.86■□□□□ 0.29
CDC42-203ENST00000400259 TULP1O00294 542 aaPredicted RBP16.86■□□□□ 0.29
CDC42-203ENST00000400259 MYBL1P10243 752 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 TBXAS1P24557 533 aaPredicted RBP16.86■□□□□ 0.29
CDC42-203ENST00000400259 SLC26A2P50443 739 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 MKRN4PQ13434 485 aaPredicted RBP16.86■□□□□ 0.29
CDC42-203ENST00000400259 BIRC3Q13489 604 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 CUL2Q13617 745 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 HSDL1Q3SXM5 330 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 C9orf131Q5VYM1 1079 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 CD302Q8IX05 232 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 ELMO3Q96BJ8 720 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 TRIM11Q96F44 468 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 MRPL4Q9BYD3 311 aaKnown RBP16.86■□□□□ 0.29
CDC42-203ENST00000400259 NR2E1Q9Y466 385 aa16.86■□□□□ 0.29
CDC42-203ENST00000400259 EVPLQ92817 2033 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 CCDC66A2RUB6 948 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 TOM1L1O75674 476 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 CYP1A1P04798 512 aaPredicted RBP16.85■□□□□ 0.29
CDC42-203ENST00000400259 PPFIA1Q13136 1202 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 SMYD5Q6GMV2 418 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 GOLGA6L1Q8N7Z2 621 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 PIK3R5Q8WYR1 880 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 GLG1Q92896 1179 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 ZIM3Q96PE6 472 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 APOBEC3GQ9HC16 384 aaKnown RBP16.85■□□□□ 0.29
CDC42-203ENST00000400259 PCDHA3Q9Y5H8 950 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 SRCAPQ6ZRS2 3230 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 NOP56O00567 594 aaKnown RBP16.85■□□□□ 0.29
CDC42-203ENST00000400259 CLDN3O15551 220 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 TTI1O43156 1089 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 CLTAP09496 248 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 MARCKSL1P49006 195 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 CENPCQ03188 943 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 LAMTOR4Q0VGL1 99 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 ZNF211Q13398 564 aaPredicted RBP16.85■□□□□ 0.29
CDC42-203ENST00000400259 TTLL12Q14166 644 aaPredicted RBP16.85■□□□□ 0.29
CDC42-203ENST00000400259 TRIM72Q6ZMU5 477 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 MCOLN2Q8IZK6 566 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 RUFY1Q96T51 708 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 JPH2Q9BR39 696 aaPredicted RBP16.85■□□□□ 0.29
CDC42-203ENST00000400259 FAM114A2Q9NRY5 505 aa16.85■□□□□ 0.29
CDC42-203ENST00000400259 CNOT8Q9UFF9 292 aaKnown RBP16.85■□□□□ 0.29
CDC42-203ENST00000400259 FAM187AA6NFU0 413 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 TMEM110-MUSTN1A8MSY1 372 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 EPHX2P34913 555 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 GUCY2FP51841 1108 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 DHX34Q14147 1143 aaKnown RBP16.84■□□□□ 0.29
CDC42-203ENST00000400259 HLTFQ14527 1009 aaKnown RBP eCLIP16.84■□□□□ 0.29
CDC42-203ENST00000400259 PLCB4Q15147 1175 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 CFAP58Q5T655 872 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 ARMC9Q7Z3E5 817 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 WDR49Q8IV35 697 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 ACO2Q99798 780 aaKnown RBP16.84■□□□□ 0.29
CDC42-203ENST00000400259 RAB17Q9H0T7 212 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 C2orf40Q9H1Z8 148 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 CHORDC1Q9UHD1 332 aaPredicted RBP16.84■□□□□ 0.29
CDC42-203ENST00000400259 UTP11Q9Y3A2 253 aaKnown RBP16.84■□□□□ 0.29
CDC42-203ENST00000400259 GOLGA6CA6NDK9 693 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 ABLIM1O14639 778 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 GOLGA6DP0CG33 693 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 YBX3P16989 372 aaKnown RBP eCLIP16.84■□□□□ 0.292e-8■■□□□ 11.7
CDC42-203ENST00000400259 NOP14P78316 857 aaKnown RBP16.84■□□□□ 0.29
CDC42-203ENST00000400259 LDLRAD1Q5T700 205 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 SPOPLQ6IQ16 392 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 DPY19L2Q6NUT2 758 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 TRIM50Q86XT4 487 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 ZBTB8OSQ8IWT0 167 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 DHX37Q8IY37 1157 aaKnown RBP16.84■□□□□ 0.29
CDC42-203ENST00000400259 EFCAB13Q8IY85 973 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 C1orf131Q8NDD1 294 aaKnown RBP16.84■□□□□ 0.29
CDC42-203ENST00000400259 OR5B17Q8NGF7 314 aa16.84■□□□□ 0.29
CDC42-203ENST00000400259 GTF3C2Q8WUA4 911 aaPredicted RBP16.84■□□□□ 0.29
CDC42-203ENST00000400259 ERVK-5Q9HDB9 667 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms