RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 KCNQ3O43525 872 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 GAP43P17677 238 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 SNX17Q15036 470 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 KRT40Q6A162 431 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 TMC5Q6UXY8 1006 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 ARMCX6Q7L4S7 300 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 GAS2L3Q86XJ1 694 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 LRRC71Q8N4P6 559 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 TTC8Q8TAM2 541 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 ADAM33Q9BZ11 813 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 EHD2Q9NZN4 543 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 COPEO14579 308 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 SNPHO15079 494 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 RALBP11234 206 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 ADAM9Q13443 819 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 DNAJC24Q6P3W2 148 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 GLB1LQ6UWU2 654 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 IZUMO1Q8IYV9 350 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 CSGALNACT1Q8TDX6 532 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 INTS13Q9NVM9 706 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 DPP7Q9UHL4 492 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 PCDHB12Q9Y5F1 795 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 EIF2AK4Q9P2K8 1649 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 MYO1FO00160 1098 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 MTMR2Q13614 643 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 ZNF512Q96ME7 567 aaPredicted RBP11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 TRIM62Q9BVG3 475 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 SPEF1Q9Y4P9 236 aa11.72□□□□□ -0.53
CACNA1C-217ENST00000399641 HPCAP84074 193 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 DDX39BQ13838 428 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 FUT11Q495W5 492 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 ANKS6Q68DC2 871 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 ZYG11AQ6WRX3 759 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 UCMAQ8WVF2 138 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 XPO4Q9C0E2 1151 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 RNF208Q9H0X6 261 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 STARD7Q9NQZ5 370 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 GFPT2O94808 682 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 CHGBP05060 677 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 SERPINB1P30740 379 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 FCHO2Q0JRZ9 810 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 ZNF667Q5HYK9 610 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 NUGGCQ68CJ6 796 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 TIGD7Q6NT04 549 aaPredicted RBP11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 RGL4Q8IZJ4 473 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 RHOBTB2Q9BYZ6 727 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 KDM6BO15054 1643 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 AP3D1O14617 1153 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 RNASEH1O60930 286 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 SRGAP2O75044 1071 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 DGKIO75912 1065 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 MZF1P28698 734 aaPredicted RBP11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 LRRC41Q15345 812 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 EIF2S3LQ2VIR3 472 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 MGAT5BQ3V5L5 792 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 ANKRD13AQ8IZ07 590 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 DTX3LQ8TDB6 740 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 DYNLL2Q96FJ2 89 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 MTFR1LQ9H019 292 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 UBE2TQ9NPD8 197 aaPredicted RBP11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 SLC25A13Q9UJS0 675 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 ERBB4Q15303 1308 aa11.71□□□□□ -0.53
CACNA1C-217ENST00000399641 TTLL13PA6NNM8 815 aa11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 ERVV-1B6SEH8 477 aa11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 MYO1CO00159 1063 aa11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 SPTLC1O15269 473 aa11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 PQBP1O60828 265 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 VAMP4O75379 141 aa11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 CCDC130P13994 396 aa11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 KIAA0408Q6ZU52 694 aa11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 PAIP1Q9H074 479 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 RPRD1BQ9NQG5 326 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 CYP7B1O75881 506 aa11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 PCP11498 1178 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 KCNV1Q6PIU1 500 aa11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 INTS4Q96HW7 963 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-217ENST00000399641 TIPRLO75663 272 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 GPC3P51654 580 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 NNTQ13423 1086 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 LPIN1Q14693 890 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 ERAP2Q6P179 960 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 KLHL17Q6TDP4 642 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 WDR60Q8WVS4 1066 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 GLMNQ92990 594 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 SLC4A9Q96Q91 983 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 FAM196BA6NMK8 535 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 CLDN3O15551 220 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 CLK1P49759 484 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 POU5F1Q01860 360 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 DGKKQ5KSL6 1271 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 SUSD4Q5VX71 490 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 DCAF4Q8WV16 495 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 TTC7AQ9ULT0 858 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 CDC16Q13042 620 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 UBE2SQ16763 222 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 SLC9A7Q96T83 725 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 HEMGNQ9BXL5 484 aa11.7□□□□□ -0.54
CACNA1C-217ENST00000399641 ABCB11O95342 1321 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms