RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 CMTM5Q96DZ9 223 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 RBAKQ9NYW8 714 aaPredicted RBP11.85□□□□□ -0.51
LAMA3-203ENST00000399516 QARSP47897 775 aaKnown RBP11.85□□□□□ -0.51
LAMA3-203ENST00000399516 CARSP49589 748 aaKnown RBP11.85□□□□□ -0.51
LAMA3-203ENST00000399516 AP3M2P53677 418 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 TSPY1Q01534 308 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 SYCP2LQ5T4T6 812 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 RC3H1Q5TC82 1133 aaKnown RBP11.85□□□□□ -0.51
LAMA3-203ENST00000399516 SUSD4Q5VX71 490 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 PRPF39Q86UA1 669 aaKnown RBP11.85□□□□□ -0.51
LAMA3-203ENST00000399516 MMGT1Q8N4V1 131 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 SLC44A5Q8NCS7 719 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 ZIM3Q96PE6 472 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 COA1Q9GZY4 146 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 MAD2L2Q9UI95 211 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 INO80Q9ULG1 1556 aaPredicted RBP11.85□□□□□ -0.51
LAMA3-203ENST00000399516 ATXN8OSP0DMR3 200 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 PSMC5P62195 406 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 STX3Q13277 289 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 KDM7AQ6ZMT4 941 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 THEM5Q8N1Q8 247 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 MMTAG2Q9BU76 263 aaKnown RBP11.85□□□□□ -0.51
LAMA3-203ENST00000399516 NEU2Q9Y3R4 380 aa11.85□□□□□ -0.51
LAMA3-203ENST00000399516 GYPCP04921 128 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 KRT8P05787 483 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 CDV3Q9UKY7 258 aaKnown RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 TSC22D4Q9Y3Q8 395 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 ORC4O43929 436 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 TRADDQ15628 312 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 SNRNP48Q6IEG0 339 aaKnown RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 FOXP4Q8IVH2 680 aaPredicted RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 PGBD4Q96DM1 585 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 HSPBP1Q9NZL4 362 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 CEP152O94986 1710 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 CDH2P19022 906 aaPredicted RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 KRT33BQ14525 404 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 HNRNPLLQ8WVV9 542 aaKnown RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 RIN2Q8WYP3 895 aaPredicted RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 CCT7Q99832 543 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 NOD2Q9HC29 1040 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 XPO7Q9UIA9 1087 aaKnown RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 ATP11BQ9Y2G3 1177 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 ZSCAN9O15535 394 aaPredicted RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 COPB2P35606 906 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 IRAK1P51617 712 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 KCNQ4P56696 695 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 ABCE1P61221 599 aaKnown RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 APLFQ8IW19 511 aaPredicted RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 NOA1Q8NC60 698 aaKnown RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 ADAM33Q9BZ11 813 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 MYL2P10916 166 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 HSPA13P48723 471 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 USP11P51784 963 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 RAD9BQ6WBX8 426 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 NR1H4Q96RI1 486 aaPredicted RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 MRPL4Q9BYD3 311 aaKnown RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 FMO5P49326 533 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 RCSD1Q6JBY9 416 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 OR6P1Q8NGX9 317 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 ZNF507Q8TCN5 953 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 PNKPQ96T60 521 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 C7orf25Q9BPX7 421 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 PHF20Q9BVI0 1012 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 CASS4Q9NQ75 786 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 PNPLA7Q6ZV29 1317 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 SUPT20HL1Q3ZLR7 823 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 TRIM60Q495X7 471 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 ZNF710Q8N1W2 664 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 OTUB1Q96FW1 271 aaPredicted RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 ZFYVE19Q96K21 471 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 MCEEQ96PE7 176 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 BEGAINQ9BUH8 593 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 ISCUQ9H1K1 167 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 AGPAT5Q9NUQ2 364 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 GID8Q9NWU2 228 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 RAD17O75943 681 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 RNF219Q5W0B1 726 aaPredicted RBP11.84□□□□□ -0.51
LAMA3-203ENST00000399516 CNPY4Q8N129 248 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 PIGBQ92521 554 aa11.84□□□□□ -0.51
LAMA3-203ENST00000399516 STX19Q8N4C7 294 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 LBHD1Q9BQE6 289 aaPredicted RBP11.83□□□□□ -0.52
LAMA3-203ENST00000399516 RUBCNLQ9H714 662 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 KLHL2O95198 593 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 TMED10P49755 219 aaKnown RBP11.83□□□□□ -0.52
LAMA3-203ENST00000399516 DEPDC1Q5TB30 811 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 MTHFD1LQ6UB35 978 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 TEX2Q8IWB9 1127 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 KDM4CQ9H3R0 1056 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 MANSC1Q9H8J5 431 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 GABBR1Q9UBS5 961 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 TSR3Q9UJK0 312 aaKnown RBP11.83□□□□□ -0.52
LAMA3-203ENST00000399516 RNF17Q9BXT8 1623 aaKnown RBP11.83□□□□□ -0.52
LAMA3-203ENST00000399516 P4HBP07237 508 aaKnown RBP11.83□□□□□ -0.52
LAMA3-203ENST00000399516 VHLP40337 213 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 FXR1P51114 621 aaKnown RBP eCLIP11.83□□□□□ -0.52
LAMA3-203ENST00000399516 MAP3K7CLP57077 242 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 PDIA5Q14554 519 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 UCHL3P15374 230 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 ACADSP16219 412 aa11.83□□□□□ -0.52
LAMA3-203ENST00000399516 HNRNPH1P31943 449 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms